Vibrio cholerae
| Assembly | Physical composition | Protein state | Molecular copy count | Associated components | Data consistency |
|---|---|---|---|---|---|
| 1 | Protein monomer | Monomer | Protein 1 | octyl beta-D-glucopyranoside × 1 water × 1 | Consistent with protein count |
| UniProt name | HLYA_VIBCH |
| Isoform | — |
| PDB entities | 1 |
| Chains and sequence ranges | Author chain A； PDBConstruct 6–721； UniProt 26–741 |
The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.
| Entry ID entry_id | 1xez |
| Deposition date deposition_date | 2004-09-13 |
| Structure title title | Crystal Structure Of The Vibrio Cholerae Cytolysin (HlyA) Pro-Toxin With Octylglucoside Bound |
| Keywords keywords | Pore-forming toxin, hemolysin, cytolysin, pro-toxin, water-soluble monomer, beta-prism, beta-trefoil, toxin; TOXIN |
| Experimental Method method | X-RAY DIFFRACTION |
This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.
Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
| Rg（Guinier） | 32.00 Å |
| Rg (electron density) | 31.66 Å |
| Total Rg | 31.84 Å |
| Atom count | 5085 |
| Residues | 663 |
| Excluded volume | 88836 ų |
| Maximum q | 0.500 Å⁻¹ |
| Domain ID domain_id | 1xezA01 |
| Class class | 3 — Alpha Beta |
| Architecture architecture | 30 — 2-Layer Sandwich |
| Topology topology | 110 — Translation Initiation Factor IF3 |
| Homologous superfamily homologous superfamily | 130 — Hemolytic toxin, N-terminal domain |
| Domain ID domain_id | 1xezA02 |
| Class class | 2 — Mainly Beta |
| Architecture architecture | 70 — Distorted Sandwich |
| Topology topology | 240 — Leukocidin-like |
| Homologous superfamily homologous superfamily | 20 — Leukocidin/Hemolysin toxin, cytolysin domain |
| Domain ID domain_id | 1xezA03 |
| Class class | 6 — Special |
| Architecture architecture | 20 — Other non-globular |
| Topology topology | 40 — Porin MspA ribbon fold |
| Homologous superfamily homologous superfamily | 20 — Leukocidin/Hemolysin toxin, pre-stem domain |
| Domain ID domain_id | 1xezA04 |
| Class class | 2 — Mainly Beta |
| Architecture architecture | 100 — Aligned Prism |
| Topology topology | 10 — Vitelline Membrane Outer Layer Protein I, subunit A |
| Homologous superfamily homologous superfamily | 30 — Jacalin-like lectin domain |