Agrobacterium tumefaciens
| Assembly | 物理组成 | 蛋白状态 | 分子拷贝数 | 共同组分 | 数据核对 |
|---|---|---|---|---|---|
| 1 | 蛋白同源多聚体 | 同源多聚体 | 蛋白 2 | NICOTINAMIDE-ADENINE-DINUCLEOTIDE × 2 water × 2 | 与蛋白数一致 |
| 2 | 蛋白同源多聚体 | 同源多聚体 | 蛋白 2 | NICOTINAMIDE-ADENINE-DINUCLEOTIDE × 2 water × 2 | 与蛋白数一致 |
| UniProt名称 | Q7CRW4_AGRT5 |
| Isoform | — |
| PDB实体 | 1 |
| 链与序列区间 | 作者链 A； PDB构建体 1–358； UniProt 1–358 作者链 B； PDB构建体 1–358； UniProt 1–358 作者链 C； PDB构建体 1–358； UniProt 1–358 作者链 D； PDB构建体 1–358； UniProt 1–358 |
页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中；数据库内部编号、导入时间和 assembly 操作表达式仅用于维护，因此不在读者页面展示。
| 条目编号 entry_id | 1z2i |
| 沉积日期 deposition_date | 2005-03-08 |
| 结构标题 title | CRYSTAL STRUCTURE OF Agrobacterium tumefaciens MALATE DEHYDROGENASE, NEW YORK STRUCTURAL GENOMICS CONSORTIUM |
| 关键词 keywords | ;MALATE DEHYDROGENASE, STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE INITIATIVE, New York SGX Research Center for Structural Genomics, NYSGXRC, OXIDOREDUCTASE ;; OXIDOREDUCTASE |
| 实验方法 method | X-RAY DIFFRACTION |
页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。
Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
| Rg（Guinier） | 26.60 Å |
| Rg（电子密度） | 25.55 Å |
| 总 Rg | 26.29 Å |
| 原子数 | 5350 |
| 残基数 | 700 |
| 排除体积 | 94127 ų |
| 最大 q | 0.500 Å⁻¹ |
| 结构域编号 domain_id | d1z2ia_ |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.122 — L-sulfolactate dehydrogenase-like |
| 超家族 Superfamily superfamily | c.122.1 — L-sulfolactate dehydrogenase-like |
| 家族 Family family | c.122.1.0 — automated matches |
| 结构域编号 domain_id | d1z2ib_ |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.122 — L-sulfolactate dehydrogenase-like |
| 超家族 Superfamily superfamily | c.122.1 — L-sulfolactate dehydrogenase-like |
| 家族 Family family | c.122.1.0 — automated matches |
| 结构域编号 domain_id | d1z2ic_ |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.122 — L-sulfolactate dehydrogenase-like |
| 超家族 Superfamily superfamily | c.122.1 — L-sulfolactate dehydrogenase-like |
| 家族 Family family | c.122.1.0 — automated matches |
| 结构域编号 domain_id | d1z2id_ |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.122 — L-sulfolactate dehydrogenase-like |
| 超家族 Superfamily superfamily | c.122.1 — L-sulfolactate dehydrogenase-like |
| 家族 Family family | c.122.1.0 — automated matches |
| 结构域编号 domain_id | 1z2iA01 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 1530 — Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 |
| 同源超家族 H-superfamily homologous superfamily | 10 — Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel |
| 结构域编号 domain_id | 1z2iA02 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 1370 — Ribosomal Protein S8; Chain: A, domain 1 |
| 同源超家族 H-superfamily homologous superfamily | 60 — Malate/L-lactate/L-sulpholactate dehydrogenase, NADPH binding domain |
| 结构域编号 domain_id | 1z2iA03 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 60 — Wheat Germ Agglutinin (Isolectin 2); domain 1 |
| 同源超家族 H-superfamily homologous superfamily | 50 — Hypothetical oxidoreductase yiak; domain 3 |
| 结构域编号 domain_id | 1z2iB01 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 1530 — Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 |
| 同源超家族 H-superfamily homologous superfamily | 10 — Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel |
| 结构域编号 domain_id | 1z2iB02 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 1370 — Ribosomal Protein S8; Chain: A, domain 1 |
| 同源超家族 H-superfamily homologous superfamily | 60 — Malate/L-lactate/L-sulpholactate dehydrogenase, NADPH binding domain |
| 结构域编号 domain_id | 1z2iB03 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 60 — Wheat Germ Agglutinin (Isolectin 2); domain 1 |
| 同源超家族 H-superfamily homologous superfamily | 50 — Hypothetical oxidoreductase yiak; domain 3 |
| 结构域编号 domain_id | 1z2iC01 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 1530 — Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 |
| 同源超家族 H-superfamily homologous superfamily | 10 — Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel |
| 结构域编号 domain_id | 1z2iC02 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 1370 — Ribosomal Protein S8; Chain: A, domain 1 |
| 同源超家族 H-superfamily homologous superfamily | 60 — Malate/L-lactate/L-sulpholactate dehydrogenase, NADPH binding domain |
| 结构域编号 domain_id | 1z2iC03 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 60 — Wheat Germ Agglutinin (Isolectin 2); domain 1 |
| 同源超家族 H-superfamily homologous superfamily | 50 — Hypothetical oxidoreductase yiak; domain 3 |
| 结构域编号 domain_id | 1z2iD01 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 1530 — Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 |
| 同源超家族 H-superfamily homologous superfamily | 10 — Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel |
| 结构域编号 domain_id | 1z2iD02 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 1370 — Ribosomal Protein S8; Chain: A, domain 1 |
| 同源超家族 H-superfamily homologous superfamily | 60 — Malate/L-lactate/L-sulpholactate dehydrogenase, NADPH binding domain |
| 结构域编号 domain_id | 1z2iD03 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 60 — Wheat Germ Agglutinin (Isolectin 2); domain 1 |
| 同源超家族 H-superfamily homologous superfamily | 50 — Hypothetical oxidoreductase yiak; domain 3 |