SAXSdb — 23at

▼

1. Protein Identity and Related Structures Protein Identity & Related Structures

Sorting nexin 1

Arabidopsis thaliana

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein homooligomer	Homooligomer	Protein 64	No other associated polymer	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	SNX1_ARATH
Isoform	—
PDB entities	1
Chains and sequence ranges	Author chain 0； PDBConstruct 1–402； UniProt 1–402 Author chain 1； PDBConstruct 1–402； UniProt 1–402 Author chain 2； PDBConstruct 1–402； UniProt 1–402 Author chain 3； PDBConstruct 1–402； UniProt 1–402 Author chain 4； PDBConstruct 1–402； UniProt 1–402 Author chain 5； PDBConstruct 1–402； UniProt 1–402 Author chain 6； PDBConstruct 1–402； UniProt 1–402 Author chain 7； PDBConstruct 1–402； UniProt 1–402 Author chain 8； PDBConstruct 1–402； UniProt 1–402 Author chain 9； PDBConstruct 1–402； UniProt 1–402 Author chain A； PDBConstruct 1–402； UniProt 1–402 Author chain AA； PDBConstruct 1–402； UniProt 1–402 Author chain AB； PDBConstruct 1–402； UniProt 1–402 Author chain B； PDBConstruct 1–402； UniProt 1–402 Author chain C； PDBConstruct 1–402； UniProt 1–402 Author chain D； PDBConstruct 1–402； UniProt 1–402 Author chain E； PDBConstruct 1–402； UniProt 1–402 Author chain F； PDBConstruct 1–402； UniProt 1–402 Author chain G； PDBConstruct 1–402； UniProt 1–402 Author chain H； PDBConstruct 1–402； UniProt 1–402 Author chain I； PDBConstruct 1–402； UniProt 1–402 Author chain J； PDBConstruct 1–402； UniProt 1–402 Author chain K； PDBConstruct 1–402； UniProt 1–402 Author chain L； PDBConstruct 1–402； UniProt 1–402 Author chain M； PDBConstruct 1–402； UniProt 1–402 Author chain N； PDBConstruct 1–402； UniProt 1–402 Author chain O； PDBConstruct 1–402； UniProt 1–402 Author chain P； PDBConstruct 1–402； UniProt 1–402 Author chain Q； PDBConstruct 1–402； UniProt 1–402 Author chain R； PDBConstruct 1–402； UniProt 1–402 Author chain S； PDBConstruct 1–402； UniProt 1–402 Author chain T； PDBConstruct 1–402； UniProt 1–402 Author chain U； PDBConstruct 1–402； UniProt 1–402 Author chain V； PDBConstruct 1–402； UniProt 1–402 Author chain W； PDBConstruct 1–402； UniProt 1–402 Author chain X； PDBConstruct 1–402； UniProt 1–402 Author chain Y； PDBConstruct 1–402； UniProt 1–402 Author chain Z； PDBConstruct 1–402； UniProt 1–402 Author chain a； PDBConstruct 1–402； UniProt 1–402 Author chain b； PDBConstruct 1–402； UniProt 1–402 Author chain c； PDBConstruct 1–402； UniProt 1–402 Author chain d； PDBConstruct 1–402； UniProt 1–402 Author chain e； PDBConstruct 1–402； UniProt 1–402 Author chain f； PDBConstruct 1–402； UniProt 1–402 Author chain g； PDBConstruct 1–402； UniProt 1–402 Author chain h； PDBConstruct 1–402； UniProt 1–402 Author chain i； PDBConstruct 1–402； UniProt 1–402 Author chain j； PDBConstruct 1–402； UniProt 1–402 Author chain k； PDBConstruct 1–402； UniProt 1–402 Author chain l； PDBConstruct 1–402； UniProt 1–402 Author chain m； PDBConstruct 1–402； UniProt 1–402 Author chain n； PDBConstruct 1–402； UniProt 1–402 Author chain o； PDBConstruct 1–402； UniProt 1–402 Author chain p； PDBConstruct 1–402； UniProt 1–402 Author chain q； PDBConstruct 1–402； UniProt 1–402 Author chain r； PDBConstruct 1–402； UniProt 1–402 Author chain s； PDBConstruct 1–402； UniProt 1–402 Author chain t； PDBConstruct 1–402； UniProt 1–402 Author chain u； PDBConstruct 1–402； UniProt 1–402 Author chain v； PDBConstruct 1–402； UniProt 1–402 Author chain w； PDBConstruct 1–402； UniProt 1–402 Author chain x； PDBConstruct 1–402； UniProt 1–402 Author chain y； PDBConstruct 1–402； UniProt 1–402 Author chain z； PDBConstruct 1–402； UniProt 1–402

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

▼

2. Structure Basics 2. Structure Basics

Entry ID entry_id	23at
Deposition date deposition_date	2026-01-30
Structure title title	Structure of Arabidopsis SNX1 (Class ll, 6-fold)
Keywords keywords	SNX protein, Arabidopsis thaliana, tube, MEMBRANE PROTEIN; MEMBRANE PROTEIN
Experimental Method method	ELECTRON MICROSCOPY

▼

3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

23at__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

23at__assembly_1__model_1 | I(q)

100 plotted points; both axes use logarithmic scales.

23at__assembly_1__model_1 | P(r) · Pending

P(r) will be calculated and displayed separately for the same assembly/model.

Rg（Guinier）	0.00 Å
Rg (electron density)	159.00 Å
Total Rg	159.00 Å
Atom count	198528
Residues	24256
Excluded volume	3548300 Å³
Maximum q	0.500 Å⁻¹

Assembly	Model	Structure unit	Oligomeric description	Status	CRYSOL	Actions
1	1	`23at__assembly_1__model_1`	64-meric （64）	Success	4.1.3-1-20251215 (887e7ef)	View Download

▶

4. Crystallography and Experiment 4. Crystallography & Experiment

▶

5. Entities and Polymers Entities & Polymers (1)

▶

Resolution resolution	8.70 Å
Resolution测定Method resolution_method	—
颗粒数 num_particles	20728

Description description	Sorting nexin 1
Molecular weight formula_weight	46594.1 kDa
Source method src_method	man
Copy count entity_count	64

Polymer type type	polypeptide(L)
Chain IDs strand_id	0,1,2,3,4,5,6,7,8,9,A,AA,AB,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,a,b,c,d,e,f,g,h,i,j,k,l,m,n,o,p,q,r,s,t,u,v,w,x,y,z
Atom count atom_count	198528

Source organism organism	Arabidopsis thaliana
Common name common_name	thale cress
NCBI taxonomy ID ncbi_taxonomy_id	3702
Host organism host_organism	Escherichia coli

Structure of Arabidopsis SNX1 (Class ll, 6-fold)

1. Protein Identity and Related Structures Protein Identity & Related Structures

Sorting nexin 1

State in the Current Structure

Other States of the Same Protein in the Database

2. Structure Basics 2. Structure Basics

3. Official assembly/model SAXS Official SAXS Profiles

23at__assembly_1__model_1

23at__assembly_1__model_1 | I(q)

23at__assembly_1__model_1 | P(r) · Pending

4. Crystallography and Experiment 4. Crystallography & Experiment

冷冻电镜 EM 3D

5. Entities and Polymers Entities & Polymers (1)

Entity 1 Entity 1 polymer

Polymer Polymer

Source Source

7. Citations (1)

Structure of Arabidopsis SNX1 (Class ll, 6-fold)

1. Protein Identity and Related Structures Protein Identity & Related Structures

Sorting nexin 1

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

2. Structure Basics 2. Structure Basics

3. Official assembly/model SAXS Official SAXS Profiles

23at__assembly_1__model_1

23at__assembly_1__model_1 | I(q)

23at__assembly_1__model_1 | P(r) · Pending

4. Crystallography and Experiment 4. Crystallography & Experiment

冷冻电镜 EM 3D

5. Entities and Polymers Entities & Polymers (1)

Entity 1 Entity 1 polymer

Polymer Polymer

Source Source

7. Citations (1)