2a3v

Structural basis for broad DNA-specificity in integron recombination

Method: X-RAY DIFFRACTION
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1. Protein Identity and Related Structures Protein Identity & Related Structures

No usable UniProt protein identity is available for this entry.

The relationship tables retain this entry's assembly and composition data, but cross-PDB links for the same protein cannot be established reliably without a unified protein identity.

Assembly Composition of the Current Entry

Assembly Physical composition Protein state 蛋白 / DNA / RNA / 其他Polymer Data consistency
1 Protein–DNA Homooligomer 4 / 4 / 0 / 0 Consistent with all polymers

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id2a3v
Deposition date deposition_date2005-06-27
Structure title titleStructural basis for broad DNA-specificity in integron recombination
Keywords keywordsProtein-DNA complex, RECOMBINATION; RECOMBINATION
Experimental Method methodX-RAY DIFFRACTION
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

2a3v__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

2a3v__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

2a3v__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)37.38 Å
Rg (electron density)36.72 Å
Total Rg37.17 Å
Atom count13066
Residues1396
Excluded volume225580 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 2a3v__assembly_1__model_1 octameric (8) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (4)

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6. Fold Classification (SCOP + CATH) 8 domains

CATH v4.4 (8 domains)

Domain ID domain_id2a3vA01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology150 — DNA polymerase; domain 1
Homologous superfamily homologous superfamily130 — Tyrosine recombinase, N-terminal domain
Domain ID domain_id2a3vA02
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology443 — hpI Integrase; Chain A
Homologous superfamily homologous superfamily10 — Intergrase catalytic core
Domain ID domain_id2a3vB01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology150 — DNA polymerase; domain 1
Homologous superfamily homologous superfamily130 — Tyrosine recombinase, N-terminal domain
Domain ID domain_id2a3vB02
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology443 — hpI Integrase; Chain A
Homologous superfamily homologous superfamily10 — Intergrase catalytic core
Domain ID domain_id2a3vC01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology150 — DNA polymerase; domain 1
Homologous superfamily homologous superfamily130 — Tyrosine recombinase, N-terminal domain
Domain ID domain_id2a3vC02
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology443 — hpI Integrase; Chain A
Homologous superfamily homologous superfamily10 — Intergrase catalytic core
Domain ID domain_id2a3vD01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology150 — DNA polymerase; domain 1
Homologous superfamily homologous superfamily130 — Tyrosine recombinase, N-terminal domain
Domain ID domain_id2a3vD02
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology443 — hpI Integrase; Chain A
Homologous superfamily homologous superfamily10 — Intergrase catalytic core
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7. Citations (1)