2ae8

Crystal Structure of Imidazoleglycerol-phosphate Dehydratase from Staphylococcus aureus subsp. aureus N315

Method: X-RAY DIFFRACTION
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1. 蛋白身份与相关结构 Protein Identity & Related Structures

Imidazoleglycerol-phosphate dehydratase

Staphylococcus aureus subsp. aureus

UniProt P64373

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白同源多聚体 同源多聚体 蛋白 24 MAGNESIUM ION × 64 water × 24 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 HIS7_STAAN
Isoform —
PDB实体 1
链与序列区间 作者链 A; PDB构建体 30–221; UniProt 1–192 作者链 B; PDB构建体 30–221; UniProt 1–192 作者链 C; PDB构建体 30–221; UniProt 1–192 作者链 D; PDB构建体 30–221; UniProt 1–192 作者链 E; PDB构建体 30–221; UniProt 1–192 作者链 F; PDB构建体 30–221; UniProt 1–192

页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中;数据库内部编号、导入时间和 assembly 操作表达式仅用于维护,因此不在读者页面展示。

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2. 结构基本信息 2. Structure Basics

条目编号 entry_id2ae8
沉积日期 deposition_date2005-07-21
结构标题 titleCrystal Structure of Imidazoleglycerol-phosphate Dehydratase from Staphylococcus aureus subsp. aureus N315
关键词 keywords;beta-alpha-beta sandwich, duplication of a half-domain, imidazoleglycerol-phosphate dehydratase (IGPD), Structural Genomics, PSI, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, LYASE ;; LYASE
实验方法 methodX-RAY DIFFRACTION
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3. Official assembly/model 理论 SAXS Official SAXS Profiles

页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。

2ae8__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

下载该曲线 .dat

2ae8__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 个绘图点;横轴和纵轴均采用对数尺度。

2ae8__assembly_1__model_1 | P(r) · Pending

新版 assembly/model P(r) 尚未计算 此处仅保留位置,不展示旧数据 r (Angstrom) P(r)
P(r) 将按相同 assembly/model 分别计算和展示。
Rg(Guinier)49.62 Å
Rg(电子密度)48.40 Å
总 Rg48.93 Å
原子数32484
残基数3984
排除体积581680 ų
最大 q0.500 Å⁻¹
Assembly Model 结构单元 聚集说明 状态 CRYSOL 操作
1 1 2ae8__assembly_1__model_1 24-meric (24) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
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4. 晶体学与实验 4. Crystallography & Experiment

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5. 实体与聚合物信息 Entities & Polymers (3)

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6. 折叠分类 (SCOP + CATH) 26 domains

SCOP 2.08 (14 domains)

结构域编号 domain_idd2ae8a1
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.14 — Ribosomal protein S5 domain 2-like
超家族 Superfamily superfamilyd.14.1 — Ribosomal protein S5 domain 2-like
家族 Family familyd.14.1.9 — Imidazole glycerol phosphate dehydratase
结构域编号 domain_idd2ae8a2
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.14 — Ribosomal protein S5 domain 2-like
超家族 Superfamily superfamilyd.14.1 — Ribosomal protein S5 domain 2-like
家族 Family familyd.14.1.9 — Imidazole glycerol phosphate dehydratase
结构域编号 domain_idd2ae8b1
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.14 — Ribosomal protein S5 domain 2-like
超家族 Superfamily superfamilyd.14.1 — Ribosomal protein S5 domain 2-like
家族 Family familyd.14.1.9 — Imidazole glycerol phosphate dehydratase
结构域编号 domain_idd2ae8b2
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.14 — Ribosomal protein S5 domain 2-like
超家族 Superfamily superfamilyd.14.1 — Ribosomal protein S5 domain 2-like
家族 Family familyd.14.1.9 — Imidazole glycerol phosphate dehydratase
结构域编号 domain_idd2ae8b3
类 Class classl — Artifacts
折叠类型 Fold foldl.1 — Tags
超家族 Superfamily superfamilyl.1.1 — Tags
家族 Family familyl.1.1.1 — Tags
结构域编号 domain_idd2ae8c1
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.14 — Ribosomal protein S5 domain 2-like
超家族 Superfamily superfamilyd.14.1 — Ribosomal protein S5 domain 2-like
家族 Family familyd.14.1.9 — Imidazole glycerol phosphate dehydratase
结构域编号 domain_idd2ae8c2
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.14 — Ribosomal protein S5 domain 2-like
超家族 Superfamily superfamilyd.14.1 — Ribosomal protein S5 domain 2-like
家族 Family familyd.14.1.9 — Imidazole glycerol phosphate dehydratase
结构域编号 domain_idd2ae8d1
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.14 — Ribosomal protein S5 domain 2-like
超家族 Superfamily superfamilyd.14.1 — Ribosomal protein S5 domain 2-like
家族 Family familyd.14.1.9 — Imidazole glycerol phosphate dehydratase
结构域编号 domain_idd2ae8d2
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.14 — Ribosomal protein S5 domain 2-like
超家族 Superfamily superfamilyd.14.1 — Ribosomal protein S5 domain 2-like
家族 Family familyd.14.1.9 — Imidazole glycerol phosphate dehydratase
结构域编号 domain_idd2ae8e1
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.14 — Ribosomal protein S5 domain 2-like
超家族 Superfamily superfamilyd.14.1 — Ribosomal protein S5 domain 2-like
家族 Family familyd.14.1.9 — Imidazole glycerol phosphate dehydratase
结构域编号 domain_idd2ae8e2
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.14 — Ribosomal protein S5 domain 2-like
超家族 Superfamily superfamilyd.14.1 — Ribosomal protein S5 domain 2-like
家族 Family familyd.14.1.9 — Imidazole glycerol phosphate dehydratase
结构域编号 domain_idd2ae8e3
类 Class classl — Artifacts
折叠类型 Fold foldl.1 — Tags
超家族 Superfamily superfamilyl.1.1 — Tags
家族 Family familyl.1.1.1 — Tags
结构域编号 domain_idd2ae8f1
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.14 — Ribosomal protein S5 domain 2-like
超家族 Superfamily superfamilyd.14.1 — Ribosomal protein S5 domain 2-like
家族 Family familyd.14.1.9 — Imidazole glycerol phosphate dehydratase
结构域编号 domain_idd2ae8f2
类 Class classd — Alpha and beta proteins (a+b)
折叠类型 Fold foldd.14 — Ribosomal protein S5 domain 2-like
超家族 Superfamily superfamilyd.14.1 — Ribosomal protein S5 domain 2-like
家族 Family familyd.14.1.9 — Imidazole glycerol phosphate dehydratase

CATH v4.4 (12 domains)

结构域编号 domain_id2ae8A01
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology230 — Ribosomal Protein S5; domain 2
同源超家族 H-superfamily homologous superfamily40 — Imidazole glycerol phosphate dehydratase; domain 1
结构域编号 domain_id2ae8A02
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology230 — Ribosomal Protein S5; domain 2
同源超家族 H-superfamily homologous superfamily40 — Imidazole glycerol phosphate dehydratase; domain 1
结构域编号 domain_id2ae8B01
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology230 — Ribosomal Protein S5; domain 2
同源超家族 H-superfamily homologous superfamily40 — Imidazole glycerol phosphate dehydratase; domain 1
结构域编号 domain_id2ae8B02
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology230 — Ribosomal Protein S5; domain 2
同源超家族 H-superfamily homologous superfamily40 — Imidazole glycerol phosphate dehydratase; domain 1
结构域编号 domain_id2ae8C01
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology230 — Ribosomal Protein S5; domain 2
同源超家族 H-superfamily homologous superfamily40 — Imidazole glycerol phosphate dehydratase; domain 1
结构域编号 domain_id2ae8C02
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology230 — Ribosomal Protein S5; domain 2
同源超家族 H-superfamily homologous superfamily40 — Imidazole glycerol phosphate dehydratase; domain 1
结构域编号 domain_id2ae8D01
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology230 — Ribosomal Protein S5; domain 2
同源超家族 H-superfamily homologous superfamily40 — Imidazole glycerol phosphate dehydratase; domain 1
结构域编号 domain_id2ae8D02
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology230 — Ribosomal Protein S5; domain 2
同源超家族 H-superfamily homologous superfamily40 — Imidazole glycerol phosphate dehydratase; domain 1
结构域编号 domain_id2ae8E01
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology230 — Ribosomal Protein S5; domain 2
同源超家族 H-superfamily homologous superfamily40 — Imidazole glycerol phosphate dehydratase; domain 1
结构域编号 domain_id2ae8E02
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology230 — Ribosomal Protein S5; domain 2
同源超家族 H-superfamily homologous superfamily40 — Imidazole glycerol phosphate dehydratase; domain 1
结构域编号 domain_id2ae8F01
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology230 — Ribosomal Protein S5; domain 2
同源超家族 H-superfamily homologous superfamily40 — Imidazole glycerol phosphate dehydratase; domain 1
结构域编号 domain_id2ae8F02
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology230 — Ribosomal Protein S5; domain 2
同源超家族 H-superfamily homologous superfamily40 — Imidazole glycerol phosphate dehydratase; domain 1
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7. 引用文献 (1)