2e35

the minimized average structure of L11 with rg refinement

Method: SOLUTION NMR
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1. Protein Identity and Related Structures Protein Identity & Related Structures

50S ribosomal protein L11

Thermus thermophilus

UniProt P36238

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein monomer Monomer Protein 1 No other associated polymer Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL11_THETH
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–147; UniProt 1–147

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id2e35
Deposition date deposition_date2006-11-20
Structure title titlethe minimized average structure of L11 with rg refinement
Keywords keywordsL11, rg, energy-minimized average structure, RNA BINDING PROTEIN; RNA BINDING PROTEIN
Experimental Method methodSOLUTION NMR
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

2e35__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

2e35__assembly_1__model_1 | I(q)

10-2 10-1 105 106 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

2e35__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)18.78 Å
Rg (electron density)17.60 Å
Total Rg18.61 Å
Atom count2223
Residues147
Excluded volume19647 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 2e35__assembly_1__model_1 monomeric (1) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (1)

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6. Fold Classification (SCOP + CATH) 4 domains

SCOP 2.08 (2 domains)

Domain ID domain_idd2e35a1
Class classa — All alpha proteins
Fold Fold folda.4 — DNA/RNA-binding 3-helical bundle
Superfamily Superfamily superfamilya.4.7 — Ribosomal protein L11, C-terminal domain
Family Family familya.4.7.1 — Ribosomal protein L11, C-terminal domain
Domain ID domain_idd2e35a2
Class classd — Alpha and beta proteins (a+b)
Fold Fold foldd.47 — Ribosomal L11/L12e N-terminal domain
Superfamily Superfamily superfamilyd.47.1 — Ribosomal L11/L12e N-terminal domain
Family Family familyd.47.1.1 — Ribosomal L11/L12e N-terminal domain

CATH v4.4 (2 domains)

Domain ID domain_id2e35A01
Class class3 — Alpha Beta
Architecture architecture30 — 2-Layer Sandwich
Topology topology1550 — Ribosomal protein L11, N-terminal domain
Homologous superfamily homologous superfamily10 — Ribosomal protein L11/L12, N-terminal domain
Domain ID domain_id2e35A02
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology10 — Arc Repressor Mutant, subunit A
Homologous superfamily homologous superfamily250 — Ribosomal protein L11/L12, C-terminal domain
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7. Citations (1)