2fml
Crystal structure of MutT/nudix family protein from Enterococcus faecalis
1. 蛋白身份与相关结构 Protein Identity & Related Structures
当前条目没有可用的 UniProt 蛋白身份。
七张关系表仍保留该条目的 assembly 与组成信息,但缺少统一蛋白身份时,不能可靠建立跨 PDB 的同蛋白链接。
当前条目的 assembly 组成
| Assembly | 物理组成 | 蛋白状态 | 蛋白 / DNA / RNA / 其他聚合物 | 数据核对 |
|---|---|---|---|---|
| 1 | 蛋白同源多聚体 | 同源多聚体 | 2 / 0 / 0 / 0 | 与蛋白数一致 |
页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中;数据库内部编号、导入时间和 assembly 操作表达式仅用于维护,因此不在读者页面展示。
2. 结构基本信息 2. Structure Basics
| 条目编号 entry_id | 2fml |
| 沉积日期 deposition_date | 2006-01-09 |
| 结构标题 title | Crystal structure of MutT/nudix family protein from Enterococcus faecalis |
| 关键词 keywords | ;MutT/nudix family protein, Enterococcus faecalis, Structural Genomics, PSI, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, UNKNOWN FUNCTION ;; STRUCTURAL GENOMICS, UNKNOWN FUNCTION |
| 实验方法 method | X-RAY DIFFRACTION |
3. Official assembly/model 理论 SAXS Official SAXS Profiles
页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。
2fml__assembly_1__model_1
Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
2fml__assembly_1__model_1 | I(q)
2fml__assembly_1__model_1 | P(r) · Pending
| Rg(Guinier) | 26.49 Å |
| Rg(电子密度) | 25.34 Å |
| 总 Rg | 26.08 Å |
| 原子数 | 4190 |
| 残基数 | 509 |
| 排除体积 | 74283 ų |
| 最大 q | 0.500 Å⁻¹ |
4. 晶体学与实验 4. Crystallography & Experiment
5. 实体与聚合物信息 Entities & Polymers (3)
6. 折叠分类 (SCOP + CATH) 10 domains
SCOP 2.08 (4 domains)
| 结构域编号 domain_id | d2fmla1 |
| 类 Class class | a — All alpha proteins |
| 折叠类型 Fold fold | a.4 — DNA/RNA-binding 3-helical bundle |
| 超家族 Superfamily superfamily | a.4.5 — 'Winged helix' DNA-binding domain |
| 家族 Family family | a.4.5.68 — Nudix-associated domain |
| 结构域编号 domain_id | d2fmla2 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.113 — Nudix |
| 超家族 Superfamily superfamily | d.113.1 — Nudix |
| 家族 Family family | d.113.1.6 — BT0354 N-terminal domain-like |
| 结构域编号 domain_id | d2fmlb1 |
| 类 Class class | a — All alpha proteins |
| 折叠类型 Fold fold | a.4 — DNA/RNA-binding 3-helical bundle |
| 超家族 Superfamily superfamily | a.4.5 — 'Winged helix' DNA-binding domain |
| 家族 Family family | a.4.5.68 — Nudix-associated domain |
| 结构域编号 domain_id | d2fmlb2 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.113 — Nudix |
| 超家族 Superfamily superfamily | d.113.1 — Nudix |
| 家族 Family family | d.113.1.6 — BT0354 N-terminal domain-like |
CATH v4.4 (6 domains)
| 结构域编号 domain_id | 2fmlA01 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 287 — Helix Hairpins |
| 同源超家族 H-superfamily homologous superfamily | 1030 — Nudix-associated domain |
| 结构域编号 domain_id | 2fmlA02 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 90 — Alpha-Beta Complex |
| 拓扑 Topology topology | 79 — Nucleoside Triphosphate Pyrophosphohydrolase |
| 同源超家族 H-superfamily homologous superfamily | 10 — Nucleoside Triphosphate Pyrophosphohydrolase |
| 结构域编号 domain_id | 2fmlA03 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 10 — Arc Repressor Mutant, subunit A |
| 同源超家族 H-superfamily homologous superfamily | 10 — Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain |
| 结构域编号 domain_id | 2fmlB01 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 287 — Helix Hairpins |
| 同源超家族 H-superfamily homologous superfamily | 1030 — Nudix-associated domain |
| 结构域编号 domain_id | 2fmlB02 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 90 — Alpha-Beta Complex |
| 拓扑 Topology topology | 79 — Nucleoside Triphosphate Pyrophosphohydrolase |
| 同源超家族 H-superfamily homologous superfamily | 10 — Nucleoside Triphosphate Pyrophosphohydrolase |
| 结构域编号 domain_id | 2fmlB03 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 10 — Arc Repressor Mutant, subunit A |
| 同源超家族 H-superfamily homologous superfamily | 10 — Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain |