2j5c

Rational conversion of substrate and product specificity in a monoterpene synthase. Structural insights into the molecular basis of rapid evolution.

Method: X-RAY DIFFRACTION
▼

1. Protein Identity and Related Structures Protein Identity & Related Structures

No usable UniProt protein identity is available for this entry.

The relationship tables retain this entry's assembly and composition data, but cross-PDB links for the same protein cannot be established reliably without a unified protein identity.

Assembly Composition of the Current Entry

Assembly Physical composition Protein state 蛋白 / DNA / RNA / 其他Polymer Data consistency
1 Protein monomer Monomer 1 / 0 / 0 / 0 Consistent with protein count
2 Protein monomer Monomer 1 / 0 / 0 / 0 Consistent with protein count

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

▼

2. Structure Basics 2. Structure Basics

Entry ID entry_id2j5c
Deposition date deposition_date2006-09-14
Structure title titleRational conversion of substrate and product specificity in a monoterpene synthase. Structural insights into the molecular basis of rapid evolution.
Keywords keywordsTERPENE SYNTHASES, 1, 8-CINEOLE, MONOTERPENE, LYASE; LYASE
Experimental Method methodX-RAY DIFFRACTION
▼

3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

2j5c__assembly_2__model_1

Assembly 2 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

2j5c__assembly_2__model_1 | I(q)

10-2 10-1 105 106 107 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

2j5c__assembly_2__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)24.68 Å
Rg (electron density)23.77 Å
Total Rg24.64 Å
Atom count4042
Residues491
Excluded volume71971 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 2j5c__assembly_1__model_1 monomeric (1) Success 4.1.3-1-20251215 (887e7ef) View Download
2 1 2j5c__assembly_2__model_1 monomeric (1) Success 4.1.3-1-20251215 (887e7ef) View Download
▶

4. Crystallography and Experiment 4. Crystallography & Experiment

▶

5. Entities and Polymers Entities & Polymers (3)

▼

6. Fold Classification (SCOP + CATH) 8 domains

SCOP 2.08 (4 domains)

Domain ID domain_idd2j5ca1
Class classa — All alpha proteins
Fold Fold folda.102 — alpha/alpha toroid
Superfamily Superfamily superfamilya.102.4 — Terpenoid cyclases/Protein prenyltransferases
Family Family familya.102.4.0 — automated matches
Domain ID domain_idd2j5ca2
Class classa — All alpha proteins
Fold Fold folda.128 — Terpenoid synthases
Superfamily Superfamily superfamilya.128.1 — Terpenoid synthases
Family Family familya.128.1.0 — automated matches
Domain ID domain_idd2j5cb1
Class classa — All alpha proteins
Fold Fold folda.102 — alpha/alpha toroid
Superfamily Superfamily superfamilya.102.4 — Terpenoid cyclases/Protein prenyltransferases
Family Family familya.102.4.0 — automated matches
Domain ID domain_idd2j5cb2
Class classa — All alpha proteins
Fold Fold folda.128 — Terpenoid synthases
Superfamily Superfamily superfamilya.128.1 — Terpenoid synthases
Family Family familya.128.1.0 — automated matches

CATH v4.4 (4 domains)

Domain ID domain_id2j5cA01
Class class1 — Mainly Alpha
Architecture architecture50 — Alpha/alpha barrel
Topology topology10 — Glycosyltransferase
Homologous superfamily homologous superfamily130 — Terpene synthase, N-terminal domain
Domain ID domain_id2j5cA02
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology600 — Farnesyl Diphosphate Synthase
Homologous superfamily homologous superfamily10 — Farnesyl Diphosphate Synthase
Domain ID domain_id2j5cB01
Class class1 — Mainly Alpha
Architecture architecture50 — Alpha/alpha barrel
Topology topology10 — Glycosyltransferase
Homologous superfamily homologous superfamily130 — Terpene synthase, N-terminal domain
Domain ID domain_id2j5cB02
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology600 — Farnesyl Diphosphate Synthase
Homologous superfamily homologous superfamily10 — Farnesyl Diphosphate Synthase
▶

7. Citations (1)