2jfb
3D Structure of Lumazine Synthase from Candida albicans
1. 蛋白身份与相关结构 Protein Identity & Related Structures
当前条目没有可用的 UniProt 蛋白身份。
七张关系表仍保留该条目的 assembly 与组成信息,但缺少统一蛋白身份时,不能可靠建立跨 PDB 的同蛋白链接。
当前条目的 assembly 组成
| Assembly | 物理组成 | 蛋白状态 | 蛋白 / DNA / RNA / 其他聚合物 | 数据核对 |
|---|---|---|---|---|
| 1 | 蛋白同源多聚体 | 同源多聚体 | 5 / 0 / 0 / 0 | 与蛋白数一致 |
| 2 | 蛋白同源多聚体 | 同源多聚体 | 5 / 0 / 0 / 0 | 与蛋白数一致 |
| 3 | 蛋白同源多聚体 | 同源多聚体 | 5 / 0 / 0 / 0 | 与蛋白数一致 |
页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中;数据库内部编号、导入时间和 assembly 操作表达式仅用于维护,因此不在读者页面展示。
2. 结构基本信息 2. Structure Basics
| 条目编号 entry_id | 2jfb |
| 沉积日期 deposition_date | 2007-01-30 |
| 结构标题 title | 3D Structure of Lumazine Synthase from Candida albicans |
| 关键词 keywords | TRANSFERASE, CANDIDA ALBICANS, LUMAZINE SYNTHASE, RIBOFLAVIN BIOSYNTHESIS; TRANSFERASE |
| 实验方法 method | X-RAY DIFFRACTION |
3. Official assembly/model 理论 SAXS Official SAXS Profiles
页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。
2jfb__assembly_1__model_1
Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
2jfb__assembly_1__model_1 | I(q)
2jfb__assembly_1__model_1 | P(r) · Pending
| Rg(Guinier) | 27.90 Å |
| Rg(电子密度) | 26.62 Å |
| 总 Rg | 27.57 Å |
| 原子数 | 6013 |
| 残基数 | 765 |
| 排除体积 | 108350 ų |
| 最大 q | 0.500 Å⁻¹ |
4. 晶体学与实验 4. Crystallography & Experiment
5. 实体与聚合物信息 Entities & Polymers (4)
6. 折叠分类 (SCOP + CATH) 30 domains
SCOP 2.08 (15 domains)
| 结构域编号 domain_id | d2jfba_ |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.16 — Lumazine synthase |
| 超家族 Superfamily superfamily | c.16.1 — Lumazine synthase |
| 家族 Family family | c.16.1.1 — Lumazine synthase |
| 结构域编号 domain_id | d2jfbb_ |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.16 — Lumazine synthase |
| 超家族 Superfamily superfamily | c.16.1 — Lumazine synthase |
| 家族 Family family | c.16.1.1 — Lumazine synthase |
| 结构域编号 domain_id | d2jfbc_ |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.16 — Lumazine synthase |
| 超家族 Superfamily superfamily | c.16.1 — Lumazine synthase |
| 家族 Family family | c.16.1.1 — Lumazine synthase |
| 结构域编号 domain_id | d2jfbd_ |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.16 — Lumazine synthase |
| 超家族 Superfamily superfamily | c.16.1 — Lumazine synthase |
| 家族 Family family | c.16.1.1 — Lumazine synthase |
| 结构域编号 domain_id | d2jfbe_ |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.16 — Lumazine synthase |
| 超家族 Superfamily superfamily | c.16.1 — Lumazine synthase |
| 家族 Family family | c.16.1.1 — Lumazine synthase |
| 结构域编号 domain_id | d2jfbf_ |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.16 — Lumazine synthase |
| 超家族 Superfamily superfamily | c.16.1 — Lumazine synthase |
| 家族 Family family | c.16.1.1 — Lumazine synthase |
| 结构域编号 domain_id | d2jfbg_ |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.16 — Lumazine synthase |
| 超家族 Superfamily superfamily | c.16.1 — Lumazine synthase |
| 家族 Family family | c.16.1.1 — Lumazine synthase |
| 结构域编号 domain_id | d2jfbh_ |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.16 — Lumazine synthase |
| 超家族 Superfamily superfamily | c.16.1 — Lumazine synthase |
| 家族 Family family | c.16.1.1 — Lumazine synthase |
| 结构域编号 domain_id | d2jfbi_ |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.16 — Lumazine synthase |
| 超家族 Superfamily superfamily | c.16.1 — Lumazine synthase |
| 家族 Family family | c.16.1.1 — Lumazine synthase |
| 结构域编号 domain_id | d2jfbj_ |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.16 — Lumazine synthase |
| 超家族 Superfamily superfamily | c.16.1 — Lumazine synthase |
| 家族 Family family | c.16.1.1 — Lumazine synthase |
| 结构域编号 domain_id | d2jfbk_ |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.16 — Lumazine synthase |
| 超家族 Superfamily superfamily | c.16.1 — Lumazine synthase |
| 家族 Family family | c.16.1.1 — Lumazine synthase |
| 结构域编号 domain_id | d2jfbl_ |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.16 — Lumazine synthase |
| 超家族 Superfamily superfamily | c.16.1 — Lumazine synthase |
| 家族 Family family | c.16.1.1 — Lumazine synthase |
| 结构域编号 domain_id | d2jfbm_ |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.16 — Lumazine synthase |
| 超家族 Superfamily superfamily | c.16.1 — Lumazine synthase |
| 家族 Family family | c.16.1.1 — Lumazine synthase |
| 结构域编号 domain_id | d2jfbn_ |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.16 — Lumazine synthase |
| 超家族 Superfamily superfamily | c.16.1 — Lumazine synthase |
| 家族 Family family | c.16.1.1 — Lumazine synthase |
| 结构域编号 domain_id | d2jfbo_ |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.16 — Lumazine synthase |
| 超家族 Superfamily superfamily | c.16.1 — Lumazine synthase |
| 家族 Family family | c.16.1.1 — Lumazine synthase |
CATH v4.4 (15 domains)
| 结构域编号 domain_id | 2jfbA00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 50 — Rossmann fold |
| 同源超家族 H-superfamily homologous superfamily | 960 — Lumazine/riboflavin synthase |
| 结构域编号 domain_id | 2jfbB00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 50 — Rossmann fold |
| 同源超家族 H-superfamily homologous superfamily | 960 — Lumazine/riboflavin synthase |
| 结构域编号 domain_id | 2jfbC00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 50 — Rossmann fold |
| 同源超家族 H-superfamily homologous superfamily | 960 — Lumazine/riboflavin synthase |
| 结构域编号 domain_id | 2jfbD00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 50 — Rossmann fold |
| 同源超家族 H-superfamily homologous superfamily | 960 — Lumazine/riboflavin synthase |
| 结构域编号 domain_id | 2jfbE00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 50 — Rossmann fold |
| 同源超家族 H-superfamily homologous superfamily | 960 — Lumazine/riboflavin synthase |
| 结构域编号 domain_id | 2jfbF00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 50 — Rossmann fold |
| 同源超家族 H-superfamily homologous superfamily | 960 — Lumazine/riboflavin synthase |
| 结构域编号 domain_id | 2jfbG00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 50 — Rossmann fold |
| 同源超家族 H-superfamily homologous superfamily | 960 — Lumazine/riboflavin synthase |
| 结构域编号 domain_id | 2jfbH00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 50 — Rossmann fold |
| 同源超家族 H-superfamily homologous superfamily | 960 — Lumazine/riboflavin synthase |
| 结构域编号 domain_id | 2jfbI00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 50 — Rossmann fold |
| 同源超家族 H-superfamily homologous superfamily | 960 — Lumazine/riboflavin synthase |
| 结构域编号 domain_id | 2jfbJ00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 50 — Rossmann fold |
| 同源超家族 H-superfamily homologous superfamily | 960 — Lumazine/riboflavin synthase |
| 结构域编号 domain_id | 2jfbK00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 50 — Rossmann fold |
| 同源超家族 H-superfamily homologous superfamily | 960 — Lumazine/riboflavin synthase |
| 结构域编号 domain_id | 2jfbL00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 50 — Rossmann fold |
| 同源超家族 H-superfamily homologous superfamily | 960 — Lumazine/riboflavin synthase |
| 结构域编号 domain_id | 2jfbM00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 50 — Rossmann fold |
| 同源超家族 H-superfamily homologous superfamily | 960 — Lumazine/riboflavin synthase |
| 结构域编号 domain_id | 2jfbN00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 50 — Rossmann fold |
| 同源超家族 H-superfamily homologous superfamily | 960 — Lumazine/riboflavin synthase |
| 结构域编号 domain_id | 2jfbO00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 50 — Rossmann fold |
| 同源超家族 H-superfamily homologous superfamily | 960 — Lumazine/riboflavin synthase |