Escherichia coli
| Assembly | Physical composition | Protein state | Molecular copy count | Associated components | Data consistency |
|---|---|---|---|---|---|
| 1 | Protein monomer | Monomer | Protein 1 | No other associated polymer | Consistent with protein count |
| UniProt name | NIRD_ECOLI |
| Isoform | — |
| PDB entities | 1 |
| Chains and sequence ranges | Author chain A； PDBConstruct 4–111； UniProt 1–108 |
The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.
| Entry ID entry_id | 2jo6 |
| Deposition date deposition_date | 2007-02-21 |
| Structure title title | NMR structure of the E.coli protein NirD, Northeast Structural Genomics target ET100 |
| Keywords keywords | ;all beta, ISP domain, Rieske iron-sulfur protein, 3-layer sandwich, Structural Genomics, PSI-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, OXIDOREDUCTASE ;; OXIDOREDUCTASE |
| Experimental Method method | SOLUTION NMR |
This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.
Assembly 1 · Model 3 · CRYSOL 4.1.3-1-20251215 (887e7ef)
| Rg（Guinier） | 15.04 Å |
| Rg (electron density) | 13.61 Å |
| Total Rg | 15.01 Å |
| Atom count | 1731 |
| Residues | 110 |
| Excluded volume | 15503 ų |
| Maximum q | 0.500 Å⁻¹ |
| Assembly | Model | Structure unit | Oligomeric description | Status | CRYSOL | Actions |
|---|---|---|---|---|---|---|
| 1 | 1 | 2jo6__assembly_1__model_1 |
monomeric （1） | Success | 4.1.3-1-20251215 (887e7ef) | View Download |
| 1 | 2 | 2jo6__assembly_1__model_2 |
monomeric （1） | Success | 4.1.3-1-20251215 (887e7ef) | View Download |
| 1 | 3 | 2jo6__assembly_1__model_3 |
monomeric （1） | Success | 4.1.3-1-20251215 (887e7ef) | View Download |
| 1 | 4 | 2jo6__assembly_1__model_4 |
monomeric （1） | Success | 4.1.3-1-20251215 (887e7ef) | View Download |
| 1 | 5 | 2jo6__assembly_1__model_5 |
monomeric （1） | Success | 4.1.3-1-20251215 (887e7ef) | View Download |
| 1 | 6 | 2jo6__assembly_1__model_6 |
monomeric （1） | Success | 4.1.3-1-20251215 (887e7ef) | View Download |
| 1 | 7 | 2jo6__assembly_1__model_7 |
monomeric （1） | Success | 4.1.3-1-20251215 (887e7ef) | View Download |
| 1 | 8 | 2jo6__assembly_1__model_8 |
monomeric （1） | Success | 4.1.3-1-20251215 (887e7ef) | View Download |
| 1 | 9 | 2jo6__assembly_1__model_9 |
monomeric （1） | Success | 4.1.3-1-20251215 (887e7ef) | View Download |
| 1 | 10 | 2jo6__assembly_1__model_10 |
monomeric （1） | Success | 4.1.3-1-20251215 (887e7ef) | View Download |
| 1 | 11 | 2jo6__assembly_1__model_11 |
monomeric （1） | Success | 4.1.3-1-20251215 (887e7ef) | View Download |
| 1 | 12 | 2jo6__assembly_1__model_12 |
monomeric （1） | Success | 4.1.3-1-20251215 (887e7ef) | View Download |
| 1 | 13 | 2jo6__assembly_1__model_13 |
monomeric （1） | Success | 4.1.3-1-20251215 (887e7ef) | View Download |
| 1 | 14 | 2jo6__assembly_1__model_14 |
monomeric （1） | Success | 4.1.3-1-20251215 (887e7ef) | View Download |
| 1 | 15 | 2jo6__assembly_1__model_15 |
monomeric （1） | Success | 4.1.3-1-20251215 (887e7ef) | View Download |
| 1 | 16 | 2jo6__assembly_1__model_16 |
monomeric （1） | Success | 4.1.3-1-20251215 (887e7ef) | View Download |
| 1 | 17 | 2jo6__assembly_1__model_17 |
monomeric （1） | Success | 4.1.3-1-20251215 (887e7ef) | View Download |
| 1 | 18 | 2jo6__assembly_1__model_18 |
monomeric （1） | Success | 4.1.3-1-20251215 (887e7ef) | View Download |
| 1 | 19 | 2jo6__assembly_1__model_19 |
monomeric （1） | Success | 4.1.3-1-20251215 (887e7ef) | View Download |
| 1 | 20 | 2jo6__assembly_1__model_20 |
monomeric （1） | Success | 4.1.3-1-20251215 (887e7ef) | View Download |
| Domain ID domain_id | d2jo6a1 |
| Class class | b — All beta proteins |
| Fold Fold fold | b.33 — ISP domain |
| Superfamily Superfamily superfamily | b.33.1 — ISP domain |
| Family Family family | b.33.1.3 — NirD-like |
| Domain ID domain_id | d2jo6a2 |
| Class class | l — Artifacts |
| Fold Fold fold | l.1 — Tags |
| Superfamily Superfamily superfamily | l.1.1 — Tags |
| Family Family family | l.1.1.1 — Tags |
| Domain ID domain_id | 2jo6A00 |
| Class class | 2 — Mainly Beta |
| Architecture architecture | 102 — 3-layer Sandwich |
| Topology topology | 10 — Rieske Iron-sulfur Protein |
| Homologous superfamily homologous superfamily | 10 — Rieske [2Fe-2S] iron-sulphur domain |