Saccharomyces cerevisiae
| Assembly | Physical composition | Protein state | Molecular copy count | Associated components | Data consistency |
|---|---|---|---|---|---|
| 1 | Protein monomer | Monomer | Protein 1 | No other associated polymer | Consistent with protein count |
| UniProt name | DCP2_YEAST |
| Isoform | — |
| PDB entities | 1 |
| Chains and sequence ranges | Author chain A； PDBConstruct 1–146； UniProt 100–245 |
The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.
| Entry ID entry_id | 2jvb |
| Deposition date deposition_date | 2007-09-16 |
| Structure title title | Solution Structure of Catalytic Domain of yDcp2 |
| Keywords keywords | ;Dcp2, mRNA decay, decapping, Cytoplasm, Hydrolase, Manganese, Metal-binding, mRNA processing, Nonsense-mediated mRNA decay, Nucleus, Phosphorylation, RNA-binding ;; HYDROLASE |
| Experimental Method method | SOLUTION NMR |
This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.
Assembly 1 · Model 8 · CRYSOL 4.1.3-1-20251215 (887e7ef)
| Rg（Guinier） | 17.07 Å |
| Rg (electron density) | 15.50 Å |
| Total Rg | 16.78 Å |
| Atom count | 2446 |
| Residues | 146 |
| Excluded volume | 21844 ų |
| Maximum q | 0.500 Å⁻¹ |
| Assembly | Model | Structure unit | Oligomeric description | Status | CRYSOL | Actions |
|---|---|---|---|---|---|---|
| 1 | 1 | 2jvb__assembly_1__model_1 |
monomeric （1） | Success | 4.1.3-1-20251215 (887e7ef) | View Download |
| 1 | 2 | 2jvb__assembly_1__model_2 |
monomeric （1） | Success | 4.1.3-1-20251215 (887e7ef) | View Download |
| 1 | 3 | 2jvb__assembly_1__model_3 |
monomeric （1） | Success | 4.1.3-1-20251215 (887e7ef) | View Download |
| 1 | 4 | 2jvb__assembly_1__model_4 |
monomeric （1） | Success | 4.1.3-1-20251215 (887e7ef) | View Download |
| 1 | 5 | 2jvb__assembly_1__model_5 |
monomeric （1） | Success | 4.1.3-1-20251215 (887e7ef) | View Download |
| 1 | 6 | 2jvb__assembly_1__model_6 |
monomeric （1） | Success | 4.1.3-1-20251215 (887e7ef) | View Download |
| 1 | 7 | 2jvb__assembly_1__model_7 |
monomeric （1） | Success | 4.1.3-1-20251215 (887e7ef) | View Download |
| 1 | 8 | 2jvb__assembly_1__model_8 |
monomeric （1） | Success | 4.1.3-1-20251215 (887e7ef) | View Download |
| 1 | 9 | 2jvb__assembly_1__model_9 |
monomeric （1） | Success | 4.1.3-1-20251215 (887e7ef) | View Download |
| 1 | 10 | 2jvb__assembly_1__model_10 |
monomeric （1） | Success | 4.1.3-1-20251215 (887e7ef) | View Download |
| Domain ID domain_id | d2jvba_ |
| Class class | d — Alpha and beta proteins (a+b) |
| Fold Fold fold | d.113 — Nudix |
| Superfamily Superfamily superfamily | d.113.1 — Nudix |
| Family Family family | d.113.1.0 — automated matches |
| Domain ID domain_id | 2jvbA00 |
| Class class | 3 — Alpha Beta |
| Architecture architecture | 90 — Alpha-Beta Complex |
| Topology topology | 79 — Nucleoside Triphosphate Pyrophosphohydrolase |
| Homologous superfamily homologous superfamily | 10 — Nucleoside Triphosphate Pyrophosphohydrolase |