2oce

Crystal structure of Tex family protein PA5201 from Pseudomonas aeruginosa

Method: X-RAY DIFFRACTION
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1. 蛋白身份与相关结构 Protein Identity & Related Structures

Hypothetical protein PA5201

Pseudomonas aeruginosa PAO1

UniProt Q9HTY8

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白单体 单体 蛋白 1 water × 1 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 Q9HTY8_PSEAE
Isoform —
PDB实体 1
链与序列区间 作者链 A; PDB构建体 3–780; UniProt 2–779

页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中;数据库内部编号、导入时间和 assembly 操作表达式仅用于维护,因此不在读者页面展示。

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2. 结构基本信息 2. Structure Basics

条目编号 entry_id2oce
沉积日期 deposition_date2006-12-20
结构标题 titleCrystal structure of Tex family protein PA5201 from Pseudomonas aeruginosa
关键词 keywords;Conserved hypothetical protein PA5201, putative transcriptional accessory protein, Structural Genomics, PSI, Protein Structure Initiative, New York Structural Genomics Research Consortium, NYSGRC, New York SGX Research Center for Structural Genomics, NYSGXRC, UNKNOWN FUNCTION ;; STRUCTURAL GENOMICS, UNKNOWN FUNCTION
实验方法 methodX-RAY DIFFRACTION
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3. Official assembly/model 理论 SAXS Official SAXS Profiles

页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。

2oce__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

下载该曲线 .dat

2oce__assembly_1__model_1 | I(q)

10-2 10-1 106 107 q (1/Angstrom) I(q)
100 个绘图点;横轴和纵轴均采用对数尺度。

2oce__assembly_1__model_1 | P(r) · Pending

新版 assembly/model P(r) 尚未计算 此处仅保留位置,不展示旧数据 r (Angstrom) P(r)
P(r) 将按相同 assembly/model 分别计算和展示。
Rg(Guinier)33.68 Å
Rg(电子密度)33.48 Å
总 Rg33.84 Å
原子数5610
残基数729
排除体积100080 ų
最大 q0.500 Å⁻¹
Assembly Model 结构单元 聚集说明 状态 CRYSOL 操作
1 1 2oce__assembly_1__model_1 monomeric (1) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
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4. 晶体学与实验 4. Crystallography & Experiment

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5. 实体与聚合物信息 Entities & Polymers (2)

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6. 折叠分类 (SCOP + CATH) 10 domains

SCOP 2.08 (5 domains)

结构域编号 domain_idd2ocea1
类 Class classa — All alpha proteins
折叠类型 Fold folda.60 — SAM domain-like
超家族 Superfamily superfamilya.60.2 — RuvA domain 2-like
家族 Family familya.60.2.6 — Tex HhH-containing domain-like
结构域编号 domain_idd2ocea2
类 Class classa — All alpha proteins
折叠类型 Fold folda.60 — SAM domain-like
超家族 Superfamily superfamilya.60.2 — RuvA domain 2-like
家族 Family familya.60.2.6 — Tex HhH-containing domain-like
结构域编号 domain_idd2ocea3
类 Class classa — All alpha proteins
折叠类型 Fold folda.294 — Tex N-terminal region-like
超家族 Superfamily superfamilya.294.1 — Tex N-terminal region-like
家族 Family familya.294.1.1 — Tex N-terminal region-like
结构域编号 domain_idd2ocea4
类 Class classb — All beta proteins
折叠类型 Fold foldb.40 — OB-fold
超家族 Superfamily superfamilyb.40.4 — Nucleic acid-binding proteins
家族 Family familyb.40.4.5 — Cold shock DNA-binding domain-like
结构域编号 domain_idd2ocea5
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.55 — Ribonuclease H-like motif
超家族 Superfamily superfamilyc.55.3 — Ribonuclease H-like
家族 Family familyc.55.3.13 — Tex RuvX-like domain-like

CATH v4.4 (5 domains)

结构域编号 domain_id2oceA01
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology10 — Arc Repressor Mutant, subunit A
同源超家族 H-superfamily homologous superfamily650 — RuvA domain 2-like
结构域编号 domain_id2oceA02
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology3500 — Tex N-terminal region-like
同源超家族 H-superfamily homologous superfamily10 — Tex N-terminal region-like
结构域编号 domain_id2oceA03
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology420 — Nucleotidyltransferase; domain 5
同源超家族 H-superfamily homologous superfamily140 — YqgF/RNase H-like domain
结构域编号 domain_id2oceA04
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology150 — DNA polymerase; domain 1
同源超家族 H-superfamily homologous superfamily310 — Tex RuvX-like domain-like
结构域编号 domain_id2oceA05
类 Class class2 — Mainly Beta
架构 Architecture architecture40 — Beta Barrel
拓扑 Topology topology50 — OB fold (Dihydrolipoamide Acetyltransferase, E2P)
同源超家族 H-superfamily homologous superfamily140 — Nucleic acid-binding proteins
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7. 引用文献 (1)