Neisseria meningitidis serogroup B
| Assembly | 物理组成 | 蛋白状态 | 分子拷贝数 | 共同组分 | 数据核对 |
|---|---|---|---|---|---|
| 1 | 蛋白同源多聚体 | 同源多聚体 | 蛋白 4 | CHLORIDE ION × 5 SODIUM ION × 1 GLYCEROL × 4 water × 4 | 与蛋白数一致 |
| UniProt名称 | KDSA_NEIMB |
| Isoform | — |
| PDB实体 | 1 |
| 链与序列区间 | 作者链 A； PDB构建体 1–280； UniProt 1–280 作者链 B； PDB构建体 1–280； UniProt 1–280 作者链 C； PDB构建体 1–280； UniProt 1–280 作者链 D； PDB构建体 1–280； UniProt 1–280 |
页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中；数据库内部编号、导入时间和 assembly 操作表达式仅用于维护，因此不在读者页面展示。
| 条目编号 entry_id | 2qkf |
| 沉积日期 deposition_date | 2007-07-11 |
| 结构标题 title | Crystal structure of 3-deoxy-d-manno-octulosonate 8-phosphate synthase (KDO8PS) from Neisseria meningitidis |
| 关键词 keywords | ;MANNO-OCTULOSONATE, SYNTHASE, LIPOPOLYSACCHARIDE, KDOP, KDO8 KDOPS, KDO8PS, TIM barrel, Lipopolysaccharide biosynthesis, Transferase, LYASE ;; TRANSFERASE |
| 实验方法 method | X-RAY DIFFRACTION |
页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。
Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
| Rg（Guinier） | 31.59 Å |
| Rg（电子密度） | 30.78 Å |
| 总 Rg | 31.44 Å |
| 原子数 | 7778 |
| 残基数 | 1011 |
| 排除体积 | 140510 ų |
| 最大 q | 0.500 Å⁻¹ |
| 结构域编号 domain_id | d2qkfa_ |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.1 — TIM beta/alpha-barrel |
| 超家族 Superfamily superfamily | c.1.10 — Aldolase |
| 家族 Family family | c.1.10.4 — Class I DAHP synthetase |
| 结构域编号 domain_id | d2qkfb_ |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.1 — TIM beta/alpha-barrel |
| 超家族 Superfamily superfamily | c.1.10 — Aldolase |
| 家族 Family family | c.1.10.4 — Class I DAHP synthetase |
| 结构域编号 domain_id | d2qkfc_ |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.1 — TIM beta/alpha-barrel |
| 超家族 Superfamily superfamily | c.1.10 — Aldolase |
| 家族 Family family | c.1.10.4 — Class I DAHP synthetase |
| 结构域编号 domain_id | d2qkfd_ |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.1 — TIM beta/alpha-barrel |
| 超家族 Superfamily superfamily | c.1.10 — Aldolase |
| 家族 Family family | c.1.10.4 — Class I DAHP synthetase |
| 结构域编号 domain_id | 2qkfA00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 20 — Alpha-Beta Barrel |
| 拓扑 Topology topology | 20 — TIM Barrel |
| 同源超家族 H-superfamily homologous superfamily | 70 — Aldolase class I |
| 结构域编号 domain_id | 2qkfB00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 20 — Alpha-Beta Barrel |
| 拓扑 Topology topology | 20 — TIM Barrel |
| 同源超家族 H-superfamily homologous superfamily | 70 — Aldolase class I |
| 结构域编号 domain_id | 2qkfC00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 20 — Alpha-Beta Barrel |
| 拓扑 Topology topology | 20 — TIM Barrel |
| 同源超家族 H-superfamily homologous superfamily | 70 — Aldolase class I |
| 结构域编号 domain_id | 2qkfD00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 20 — Alpha-Beta Barrel |
| 拓扑 Topology topology | 20 — TIM Barrel |
| 同源超家族 H-superfamily homologous superfamily | 70 — Aldolase class I |