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2r6p

Fit of E protein and Fab 1A1D-2 into 24 angstrom resolution cryoEM map of Fab complexed with dengue 2 virus.

Method: ELECTRON MICROSCOPY Dmax: 197.6 Å Quality: REASONABLE
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1. 蛋白身份与相关结构 Protein Identity & Related Structures

Major envelope protein E

Dengue virus 2 Puerto Rico/PR159-S1/1969

UniProt P18356

当前结构中的状态

Assembly 聚集状态 构建体 突变与修饰 配体、离子与共同组分 实验方法与环境 结构质量
1 蛋白异源复合物 异源复合物 蛋白 × 420 PDB 声明：420-MERIC（420） 与蛋白拷贝数一致 链 A； UniProt 181–570 链 B； UniProt 181–570 链 C； UniProt 181–570 片段：E protein Heavy chain of 1A1D-2 × 120 Light chain of 1A1D-2 × 120 ELECTRON MICROSCOPY cryo-EM缓冲液：pH 7.6 cryo-EM玻璃化条件：冷冻剂 ETHANE；SAMPLES WERE PREPARED AS THIN LAYERS OF VITREOUS ICE AND MAINTAINED AT LIQUID NITROGEN TEMPERATURE IN THE ELECTRON MICROSCOPE 分辨率 24.00 Å
2 蛋白异源复合物 异源复合物 蛋白 × 7 PDB 声明：heptameric（7） 与蛋白拷贝数一致 链 A； UniProt 181–570 链 B； UniProt 181–570 链 C； UniProt 181–570 片段：E protein Heavy chain of 1A1D-2 × 2 Light chain of 1A1D-2 × 2 ELECTRON MICROSCOPY cryo-EM缓冲液：pH 7.6 cryo-EM玻璃化条件：冷冻剂 ETHANE；SAMPLES WERE PREPARED AS THIN LAYERS OF VITREOUS ICE AND MAINTAINED AT LIQUID NITROGEN TEMPERATURE IN THE ELECTRON MICROSCOPE 分辨率 24.00 Å
3 蛋白异源复合物 异源复合物 蛋白 × 35 PDB 声明：35-meric（35） 与蛋白拷贝数一致 链 A； UniProt 181–570 链 B； UniProt 181–570 链 C； UniProt 181–570 片段：E protein Heavy chain of 1A1D-2 × 10 Light chain of 1A1D-2 × 10 ELECTRON MICROSCOPY cryo-EM缓冲液：pH 7.6 cryo-EM玻璃化条件：冷冻剂 ETHANE；SAMPLES WERE PREPARED AS THIN LAYERS OF VITREOUS ICE AND MAINTAINED AT LIQUID NITROGEN TEMPERATURE IN THE ELECTRON MICROSCOPE 分辨率 24.00 Å
4 蛋白异源复合物 异源复合物 蛋白 × 42 PDB 声明：42-meric（42） 与蛋白拷贝数一致 链 A； UniProt 181–570 链 B； UniProt 181–570 链 C； UniProt 181–570 片段：E protein Heavy chain of 1A1D-2 × 12 Light chain of 1A1D-2 × 12 ELECTRON MICROSCOPY cryo-EM缓冲液：pH 7.6 cryo-EM玻璃化条件：冷冻剂 ETHANE；SAMPLES WERE PREPARED AS THIN LAYERS OF VITREOUS ICE AND MAINTAINED AT LIQUID NITROGEN TEMPERATURE IN THE ELECTRON MICROSCOPE 分辨率 24.00 Å
5 蛋白异源复合物 异源复合物 蛋白 × 7 PDB 声明：heptameric（7） 与蛋白拷贝数一致 链 A； UniProt 181–570 链 B； UniProt 181–570 链 C； UniProt 181–570 片段：E protein Heavy chain of 1A1D-2 × 2 Light chain of 1A1D-2 × 2 ELECTRON MICROSCOPY cryo-EM缓冲液：pH 7.6 cryo-EM玻璃化条件：冷冻剂 ETHANE；SAMPLES WERE PREPARED AS THIN LAYERS OF VITREOUS ICE AND MAINTAINED AT LIQUID NITROGEN TEMPERATURE IN THE ELECTRON MICROSCOPE 分辨率 24.00 Å

数据库中的同蛋白其他状态

以下每一行都是同一 UniProt 蛋白在另一个 PDB 条目中的 biological assembly， “相对当前条目”直接指出证据层面的不同；没有差异标签表示当前已读取字段一致。

其他 PDB 相对当前条目 2R6P Assembly / 聚集状态 构建体 突变与修饰 配体、离子与非聚合物 实验方法与环境 结构质量
2JSF Solution structures of the envelope protein domain III from the dengue-2 virus 提交 2007-07-03 构建体不同 突变/修饰不同 聚集状态不同 实验方法不同 实验环境不同 结构质量不同 Assembly 1 蛋白单体 单体；蛋白 × 1 PDB 声明：monomeric
链 A 469–577（109 aa） 片段：Residues 469-577
未记录 未记录非水小分子 SOLUTION NMR
NMR测量条件 pH 7.4；298 K；离子强度（mmCIF原始值）0.31；压力 ambient
NMR样品组成 1-5 mM EDTA, 1-5 mM DTT, 1 mM sodium azide, 90% H2O/10% D2O | 90% H2O/10% D2O
分辨率未提供
2R69 Crystal structure of Fab 1A1D-2 complexed with E-DIII of Dengue virus at 3.8 angstrom resolution 提交 2007-09-05 构建体不同 突变/修饰不同 聚集状态不同 实验方法不同 实验环境不同 结构质量不同 Assembly 1 蛋白异源复合物 异源复合物；蛋白 × 3 PDB 声明：trimeric
链 A 478–574（97 aa）
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP；pH 5.8；298 K；12% PEG 3350, pH 5.8, VAPOR DIFFUSION, HANGING DROP, temperature 298K
分辨率 3.80 Å R-free 0.363
3C6R Low pH Immature Dengue Virus 提交 2008-02-05 构建体不同 突变/修饰不同 聚集状态不同 实验环境不同 结构质量不同 Assembly 1 蛋白同源多聚体 同源多聚体；蛋白 × 360 PDB 声明：360-meric
链 A 181–575（395 aa）
链 B 181–575（395 aa）
链 C 181–575（395 aa）
链 D 15–95（81 aa）
链 E 15–95（81 aa）
链 F 15–95（81 aa）
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 6；The virus was mixed in NTE buffer (10 mM Tris, 120 mM NaCl, and 1 mM EDTA at pH 8) with 50 mM MES, 120 mM NaCl at pH 5.6 to yield a final pH of 6
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 25.00 Å
3C6R Low pH Immature Dengue Virus 提交 2008-02-05 构建体不同 突变/修饰不同 聚集状态不同 实验环境不同 结构质量不同 Assembly 2 蛋白同源多聚体 同源多聚体；蛋白 × 6 PDB 声明：hexameric
链 A 181–575（395 aa）
链 B 181–575（395 aa）
链 C 181–575（395 aa）
链 D 15–95（81 aa）
链 E 15–95（81 aa）
链 F 15–95（81 aa）
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 6；The virus was mixed in NTE buffer (10 mM Tris, 120 mM NaCl, and 1 mM EDTA at pH 8) with 50 mM MES, 120 mM NaCl at pH 5.6 to yield a final pH of 6
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 25.00 Å
3C6R Low pH Immature Dengue Virus 提交 2008-02-05 构建体不同 突变/修饰不同 聚集状态不同 实验环境不同 结构质量不同 Assembly 3 蛋白同源多聚体 同源多聚体；蛋白 × 30 PDB 声明：30-meric
链 A 181–575（395 aa）
链 B 181–575（395 aa）
链 C 181–575（395 aa）
链 D 15–95（81 aa）
链 E 15–95（81 aa）
链 F 15–95（81 aa）
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 6；The virus was mixed in NTE buffer (10 mM Tris, 120 mM NaCl, and 1 mM EDTA at pH 8) with 50 mM MES, 120 mM NaCl at pH 5.6 to yield a final pH of 6
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 25.00 Å
3C6R Low pH Immature Dengue Virus 提交 2008-02-05 构建体不同 突变/修饰不同 聚集状态不同 实验环境不同 结构质量不同 Assembly 4 蛋白同源多聚体 同源多聚体；蛋白 × 36 PDB 声明：36-meric
链 A 181–575（395 aa）
链 B 181–575（395 aa）
链 C 181–575（395 aa）
链 D 15–95（81 aa）
链 E 15–95（81 aa）
链 F 15–95（81 aa）
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 6；The virus was mixed in NTE buffer (10 mM Tris, 120 mM NaCl, and 1 mM EDTA at pH 8) with 50 mM MES, 120 mM NaCl at pH 5.6 to yield a final pH of 6
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 25.00 Å
3C6R Low pH Immature Dengue Virus 提交 2008-02-05 构建体不同 突变/修饰不同 聚集状态不同 实验环境不同 结构质量不同 Assembly 5 蛋白同源多聚体 同源多聚体；蛋白 × 6 PDB 声明：hexameric
链 A 181–575（395 aa）
链 B 181–575（395 aa）
链 C 181–575（395 aa）
链 D 15–95（81 aa）
链 E 15–95（81 aa）
链 F 15–95（81 aa）
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 6；The virus was mixed in NTE buffer (10 mM Tris, 120 mM NaCl, and 1 mM EDTA at pH 8) with 50 mM MES, 120 mM NaCl at pH 5.6 to yield a final pH of 6
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 25.00 Å
3IXY The pseudo-atomic structure of dengue immature virus in complex with Fab fragments of the anti-fusion loop antibody E53 提交 2009-02-26 构建体不同 聚集状态不同 实验环境不同 结构质量不同 Assembly 1 蛋白异源复合物 异源复合物；蛋白 × 600 PDB 声明：600-MERIC
链 D 15–95（81 aa）
链 E 15–95（81 aa）
链 F 15–95（81 aa）
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.6；12 mM Tris-HCl, 120 mM NaCl, 1 mM EDTA
cryo-EM玻璃化条件 A small vial of ethane is placed inside a larger liquid nitrogen reservoir. The grid holding a few microliters of the sample is held in place at the bottom of a plunger by the means of fine tweezers. Once the ethane in the vial is completely frozen, it needs to be slightly melted. When the liquid ethane is ready, a piece of filter paper is then pressed against the sample to blot of excess buffer, sufficient to leave a thin layer on the grid. After a predetermined time, the filter paper is removed, and the plunger is allowed to drop into the liquid ethane. Once the grid enters the liquid ethane, the sample is rapidly frozen, and the grid is transferred under liquid nitrogen to a storage box immersed liquid nitrogen for later use in the microscope.；冷冻剂 ETHANE
分辨率 23.00 Å
3IXY The pseudo-atomic structure of dengue immature virus in complex with Fab fragments of the anti-fusion loop antibody E53 提交 2009-02-26 构建体不同 聚集状态不同 实验环境不同 结构质量不同 Assembly 2 蛋白异源复合物 异源复合物；蛋白 × 10 PDB 声明：decameric
链 D 15–95（81 aa）
链 E 15–95（81 aa）
链 F 15–95（81 aa）
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.6；12 mM Tris-HCl, 120 mM NaCl, 1 mM EDTA
cryo-EM玻璃化条件 A small vial of ethane is placed inside a larger liquid nitrogen reservoir. The grid holding a few microliters of the sample is held in place at the bottom of a plunger by the means of fine tweezers. Once the ethane in the vial is completely frozen, it needs to be slightly melted. When the liquid ethane is ready, a piece of filter paper is then pressed against the sample to blot of excess buffer, sufficient to leave a thin layer on the grid. After a predetermined time, the filter paper is removed, and the plunger is allowed to drop into the liquid ethane. Once the grid enters the liquid ethane, the sample is rapidly frozen, and the grid is transferred under liquid nitrogen to a storage box immersed liquid nitrogen for later use in the microscope.；冷冻剂 ETHANE
分辨率 23.00 Å
3IXY The pseudo-atomic structure of dengue immature virus in complex with Fab fragments of the anti-fusion loop antibody E53 提交 2009-02-26 构建体不同 聚集状态不同 实验环境不同 结构质量不同 Assembly 3 蛋白异源复合物 异源复合物；蛋白 × 50 PDB 声明：50-meric
链 D 15–95（81 aa）
链 E 15–95（81 aa）
链 F 15–95（81 aa）
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.6；12 mM Tris-HCl, 120 mM NaCl, 1 mM EDTA
cryo-EM玻璃化条件 A small vial of ethane is placed inside a larger liquid nitrogen reservoir. The grid holding a few microliters of the sample is held in place at the bottom of a plunger by the means of fine tweezers. Once the ethane in the vial is completely frozen, it needs to be slightly melted. When the liquid ethane is ready, a piece of filter paper is then pressed against the sample to blot of excess buffer, sufficient to leave a thin layer on the grid. After a predetermined time, the filter paper is removed, and the plunger is allowed to drop into the liquid ethane. Once the grid enters the liquid ethane, the sample is rapidly frozen, and the grid is transferred under liquid nitrogen to a storage box immersed liquid nitrogen for later use in the microscope.；冷冻剂 ETHANE
分辨率 23.00 Å
3IXY The pseudo-atomic structure of dengue immature virus in complex with Fab fragments of the anti-fusion loop antibody E53 提交 2009-02-26 构建体不同 聚集状态不同 实验环境不同 结构质量不同 Assembly 4 蛋白异源复合物 异源复合物；蛋白 × 60 PDB 声明：60-meric
链 D 15–95（81 aa）
链 E 15–95（81 aa）
链 F 15–95（81 aa）
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.6；12 mM Tris-HCl, 120 mM NaCl, 1 mM EDTA
cryo-EM玻璃化条件 A small vial of ethane is placed inside a larger liquid nitrogen reservoir. The grid holding a few microliters of the sample is held in place at the bottom of a plunger by the means of fine tweezers. Once the ethane in the vial is completely frozen, it needs to be slightly melted. When the liquid ethane is ready, a piece of filter paper is then pressed against the sample to blot of excess buffer, sufficient to leave a thin layer on the grid. After a predetermined time, the filter paper is removed, and the plunger is allowed to drop into the liquid ethane. Once the grid enters the liquid ethane, the sample is rapidly frozen, and the grid is transferred under liquid nitrogen to a storage box immersed liquid nitrogen for later use in the microscope.；冷冻剂 ETHANE
分辨率 23.00 Å
3IXY The pseudo-atomic structure of dengue immature virus in complex with Fab fragments of the anti-fusion loop antibody E53 提交 2009-02-26 构建体不同 聚集状态不同 实验环境不同 结构质量不同 Assembly 5 蛋白异源复合物 异源复合物；蛋白 × 10 PDB 声明：decameric
链 D 15–95（81 aa）
链 E 15–95（81 aa）
链 F 15–95（81 aa）
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.6；12 mM Tris-HCl, 120 mM NaCl, 1 mM EDTA
cryo-EM玻璃化条件 A small vial of ethane is placed inside a larger liquid nitrogen reservoir. The grid holding a few microliters of the sample is held in place at the bottom of a plunger by the means of fine tweezers. Once the ethane in the vial is completely frozen, it needs to be slightly melted. When the liquid ethane is ready, a piece of filter paper is then pressed against the sample to blot of excess buffer, sufficient to leave a thin layer on the grid. After a predetermined time, the filter paper is removed, and the plunger is allowed to drop into the liquid ethane. Once the grid enters the liquid ethane, the sample is rapidly frozen, and the grid is transferred under liquid nitrogen to a storage box immersed liquid nitrogen for later use in the microscope.；冷冻剂 ETHANE
分辨率 23.00 Å
3IYA Association of the pr peptides with dengue virus blocks membrane fusion at acidic pH 提交 2009-06-01 构建体不同 突变/修饰不同 聚集状态不同 实验环境不同 结构质量不同 Assembly 1 蛋白同源多聚体 同源多聚体；蛋白 × 360 PDB 声明：360-meric
链 A 181–575（395 aa）
链 B 181–575（395 aa）
链 C 181–575（395 aa）
链 D 15–95（81 aa）
链 E 15–95（81 aa）
链 F 15–95（81 aa）
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 6；6 mM Tris-HCL 25 mM MES 120 mM NaCl 1 mM EDTA
cryo-EM玻璃化条件 A small vial of ethane is placed inside a larger liquid nitrogen reservoir. The grid holding a few microliters of the sample is held in place at the bottom of a plunger by the means of fine tweezers. Once the ethane in the vial is completely frozen, it needs to be slightly melted. When the liquid ethane is ready, a piece of filter paper is then pressed against the sample to blot of excess buffer, sufficient to leave a thin layer on the grid. After a predetermined time, the filter paper is removed, and the plunger is allowed to drop into the liquid ethane. Once the grid enters the liquid ethane, the sample is rapidly frozen, and the grid is transferred under liquid nitrogen to a storage box immersed liquid nitrogen for later use in the microscope.；冷冻剂 ETHANE
分辨率 22.00 Å
3IYA Association of the pr peptides with dengue virus blocks membrane fusion at acidic pH 提交 2009-06-01 构建体不同 突变/修饰不同 聚集状态不同 实验环境不同 结构质量不同 Assembly 2 蛋白同源多聚体 同源多聚体；蛋白 × 6 PDB 声明：hexameric
链 A 181–575（395 aa）
链 B 181–575（395 aa）
链 C 181–575（395 aa）
链 D 15–95（81 aa）
链 E 15–95（81 aa）
链 F 15–95（81 aa）
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 6；6 mM Tris-HCL 25 mM MES 120 mM NaCl 1 mM EDTA
cryo-EM玻璃化条件 A small vial of ethane is placed inside a larger liquid nitrogen reservoir. The grid holding a few microliters of the sample is held in place at the bottom of a plunger by the means of fine tweezers. Once the ethane in the vial is completely frozen, it needs to be slightly melted. When the liquid ethane is ready, a piece of filter paper is then pressed against the sample to blot of excess buffer, sufficient to leave a thin layer on the grid. After a predetermined time, the filter paper is removed, and the plunger is allowed to drop into the liquid ethane. Once the grid enters the liquid ethane, the sample is rapidly frozen, and the grid is transferred under liquid nitrogen to a storage box immersed liquid nitrogen for later use in the microscope.；冷冻剂 ETHANE
分辨率 22.00 Å
3IYA Association of the pr peptides with dengue virus blocks membrane fusion at acidic pH 提交 2009-06-01 构建体不同 突变/修饰不同 聚集状态不同 实验环境不同 结构质量不同 Assembly 3 蛋白同源多聚体 同源多聚体；蛋白 × 30 PDB 声明：30-meric
链 A 181–575（395 aa）
链 B 181–575（395 aa）
链 C 181–575（395 aa）
链 D 15–95（81 aa）
链 E 15–95（81 aa）
链 F 15–95（81 aa）
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 6；6 mM Tris-HCL 25 mM MES 120 mM NaCl 1 mM EDTA
cryo-EM玻璃化条件 A small vial of ethane is placed inside a larger liquid nitrogen reservoir. The grid holding a few microliters of the sample is held in place at the bottom of a plunger by the means of fine tweezers. Once the ethane in the vial is completely frozen, it needs to be slightly melted. When the liquid ethane is ready, a piece of filter paper is then pressed against the sample to blot of excess buffer, sufficient to leave a thin layer on the grid. After a predetermined time, the filter paper is removed, and the plunger is allowed to drop into the liquid ethane. Once the grid enters the liquid ethane, the sample is rapidly frozen, and the grid is transferred under liquid nitrogen to a storage box immersed liquid nitrogen for later use in the microscope.；冷冻剂 ETHANE
分辨率 22.00 Å
3IYA Association of the pr peptides with dengue virus blocks membrane fusion at acidic pH 提交 2009-06-01 构建体不同 突变/修饰不同 聚集状态不同 实验环境不同 结构质量不同 Assembly 4 蛋白同源多聚体 同源多聚体；蛋白 × 36 PDB 声明：36-meric
链 A 181–575（395 aa）
链 B 181–575（395 aa）
链 C 181–575（395 aa）
链 D 15–95（81 aa）
链 E 15–95（81 aa）
链 F 15–95（81 aa）
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 6；6 mM Tris-HCL 25 mM MES 120 mM NaCl 1 mM EDTA
cryo-EM玻璃化条件 A small vial of ethane is placed inside a larger liquid nitrogen reservoir. The grid holding a few microliters of the sample is held in place at the bottom of a plunger by the means of fine tweezers. Once the ethane in the vial is completely frozen, it needs to be slightly melted. When the liquid ethane is ready, a piece of filter paper is then pressed against the sample to blot of excess buffer, sufficient to leave a thin layer on the grid. After a predetermined time, the filter paper is removed, and the plunger is allowed to drop into the liquid ethane. Once the grid enters the liquid ethane, the sample is rapidly frozen, and the grid is transferred under liquid nitrogen to a storage box immersed liquid nitrogen for later use in the microscope.；冷冻剂 ETHANE
分辨率 22.00 Å
3IYA Association of the pr peptides with dengue virus blocks membrane fusion at acidic pH 提交 2009-06-01 构建体不同 突变/修饰不同 聚集状态不同 实验环境不同 结构质量不同 Assembly 5 蛋白同源多聚体 同源多聚体；蛋白 × 6 PDB 声明：hexameric
链 A 181–575（395 aa）
链 B 181–575（395 aa）
链 C 181–575（395 aa）
链 D 15–95（81 aa）
链 E 15–95（81 aa）
链 F 15–95（81 aa）
未记录 未记录非水小分子 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 6；6 mM Tris-HCL 25 mM MES 120 mM NaCl 1 mM EDTA
cryo-EM玻璃化条件 A small vial of ethane is placed inside a larger liquid nitrogen reservoir. The grid holding a few microliters of the sample is held in place at the bottom of a plunger by the means of fine tweezers. Once the ethane in the vial is completely frozen, it needs to be slightly melted. When the liquid ethane is ready, a piece of filter paper is then pressed against the sample to blot of excess buffer, sufficient to leave a thin layer on the grid. After a predetermined time, the filter paper is removed, and the plunger is allowed to drop into the liquid ethane. Once the grid enters the liquid ethane, the sample is rapidly frozen, and the grid is transferred under liquid nitrogen to a storage box immersed liquid nitrogen for later use in the microscope.；冷冻剂 ETHANE
分辨率 22.00 Å

共 5 个其他 PDB 条目、17 个 assembly。 打开独立比较页并筛选聚集状态

查看构建体与数据证据
UniProt名称 POLG_DEN2U
Isoform —
PDB实体 1
链与序列区间 作者链 A； PDB构建体 1–390； UniProt 181–570 作者链 B； PDB构建体 1–390； UniProt 181–570 作者链 C； PDB构建体 1–390； UniProt 181–570

页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中；数据库内部编号、导入时间和 assembly 操作表达式仅用于维护，因此不在读者页面展示。

SAXS 散射曲线 SAXS Profile

SAXS profile for 2r6p

P(r) 距离分布 P(r) Distribution

P(r) distribution for 2r6p
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2. 结构基本信息 2. Structure Basics

条目编号 entry_id2r6p
沉积日期 deposition_date2007-09-06
结构标题 titleFit of E protein and Fab 1A1D-2 into 24 angstrom resolution cryoEM map of Fab complexed with dengue 2 virus.
关键词 keywordsFab, dengue, virus, neutralization, Virus-Immune System COMPLEX, icosahedral virus; Virus/Immune System
实验方法 methodELECTRON MICROSCOPY
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3. SAXS 参数 (CRYSOL 理论计算) 3. SAXS Parameters (CRYSOL)

回转半径 Rg (Guinier) rg_guinier65.26 Å
回转半径 Rg (电子) rg_electron65.03 Å
零角强度 I(0) i0696552000.00
分子量 molecular_weight220970.0 kDa
排除体积 excluded_volume269310 ų
包络体积 envelope_volume388100 ų
水化壳体积 shell_volume53565 ų
包络直径 envelope_diameter207.7 Å
壳层 Rg shell_rg65.39 Å
包络 Rg envelope_rg56.94 Å
形状 Rg shape_rg64.92 Å
总 Rg total_rg65.04 Å
总原子数 total_atoms—
残基数 n_residues—
球谐函数阶数 n_harmonics20
q 范围 q_range— – 0.5000 Å−1
数据点数 n_points101
壳层类型 shell_typedirectional
溶剂电子密度 solvent_density0.3340 e/ų
壳层衬度 contrast_shell0.0300 e/ų
CRYSOL 版本 crysol_version4.1.3
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4. P(r) 距离分布 (GNOM 反演) 4. P(r) Analysis (GNOM)

最大尺寸 Dmax dmax197.6 Å
Rg (实空间) rg_real65.08 Å
Rg 误差 (实空间) rg_real_error1.71 Å
I(0) (实空间) i0_real6.9650e+08
I(0) 误差 (实空间) i0_real_error1.4650e+07
Rg (倒空间) rg_reciprocal65.34 Å
I(0) (倒空间) i0_reciprocal696800000.0000
解质量估计 total_estimate0.6189
解质量评级 solution_quality REASONABLE a REASONABLE solution
P(r) 峰数 n_peaks1
主峰位置 r_peak_primary82.3 Å
偏度 Skewness skewness0.034
峰度 Kurtosis kurtosis-0.560
角度范围 angular_range— – 0.1200 Å−1
当前正则化参数 α current_alpha0.0001
最高正则化参数 α highest_alpha16900000.0000
实空间数据点数 n_real_points25
GNOM 版本 gnom_version4.1.3
质量判据 quality_criteria AN1: 0.000; Oscil: 0.937; Stabil: 0.999; Sysdev: 0.013; Positv: 1.000; Valcen: 0.997; Smooth: 0.195
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5. 晶体学与实验 5. Crystallography & Experiment

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6. 实体与聚合物信息 Entities & Polymers (3)

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8. 引用文献 (1)

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9. 文件与曲线 (10)