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1M2T
Mistletoe Lectin I from Viscum album in Complex with Adenine Monophosphate. Crystal Structure at 1.9 A Resolution
Deposited 2002-06-25
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Different construct
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
1–254(254 aa)
|
Not recorded
|
NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 6
FUC alpha-L-fucopyranose × 2
ADE ADENINE × 1
GOL GLYCEROL × 8
|
X-RAY DIFFRACTION
X-ray crystallization conditions
vapor diffusion under microgravity;pH 2.5;293 K;ammonium sulphate, pH 2.5, vapor diffusion under microgravity at 293K
|
Resolution 1.89 Å
R-free 0.240
|
|
1ONK
Mistletoe lectin I from viscum album
Deposited 2003-02-28
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein heterocomplex
Heteromer;Protein × 4
PDB declaration: tetrameric
|
Chain A
1–254(254 aa)
|
Not recorded
|
PO4 PHOSPHATE ION × 2
AZI AZIDE ION × 18
GOL GLYCEROL × 16
NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 4
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X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 2.5;293 K;40% saturated ammonium sulphate, 30% glycerol in 0.1M, pH 2.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
Resolution 2.10 Å
R-free 0.223
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|
1ONK
Mistletoe lectin I from viscum album
Deposited 2003-02-28
|
Different construct
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Protein heterocomplex
Heteromer;Protein × 2
PDB declaration: dimeric
|
Chain A
1–254(254 aa)
|
Not recorded
|
PO4 PHOSPHATE ION × 1
AZI AZIDE ION × 9
GOL GLYCEROL × 8
NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 2.5;293 K;40% saturated ammonium sulphate, 30% glycerol in 0.1M, pH 2.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
Resolution 2.10 Å
R-free 0.223
|
|
1PUM
Mistletoe lectin I in complex with galactose
Deposited 2003-06-25
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Other combination
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain A
34–282(249 aa)
Chain B
302–564(263 aa)
|
Not recorded
|
NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1
CL CHLORIDE ION × 2
SO4 SULFATE ION × 2
GOL GLYCEROL × 16
GAL beta-D-galactopyranose × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 2.5;293 K;ammonium sulphate, glycin-HCL, galactose, dioxan, pH 2.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
Resolution 2.30 Å
R-free 0.246
|
|
1SZ6
MISTLETOE LECTIN I FROM VISCUM ALBUM. CRYSTAL STRUCTURE AT 2.05 A RESOLUTION
Deposited 2004-04-04
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Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 4
PDB declaration: tetrameric
|
Chain A
34–282(249 aa)
Chain B
302–564(263 aa)
|
Not recorded
|
NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 8
SO4 SULFATE ION × 2
AZI AZIDE ION × 6
CL CHLORIDE ION × 4
GOL GLYCEROL × 30
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 2.5;293 K;40% SATURATED AMMONIUM SULPHATE, 30% GLYCEROL IN 0.1M, pH 2.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
|
Resolution 2.05 Å
R-free 0.253
|
|
2RG9
Crystal structure of viscum album mistletoe lectin I in native state at 1.95 A resolution, comparison of structure active site conformation in ricin and in viscumin
Deposited 2007-10-03
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Protein homooligomer
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain A
34–282(249 aa)
Chain B
302–564(263 aa)
|
Not recorded
|
NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 4
SO4 SULFATE ION × 1
AZI AZIDE ION × 3
CL CHLORIDE ION × 2
GOL GLYCEROL × 15
|
X-RAY DIFFRACTION
mmCIF provides none of the parsed conditions
|
Resolution 1.95 Å
R-free 0.239
|
|
3D7W
Mistletoe Lectin I in Complex with Zeatin
Deposited 2008-05-22
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Other combination
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain A
34–287(254 aa)
Fragment:Beta-galactoside-specific lectin 1 chain A isoform 1
Chain B
302–564(263 aa)
Fragment:Beta-galactoside-specific lectin 1 chain B
|
Not recorded
|
NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2
SO4 SULFATE ION × 2
GOL GLYCEROL × 4
ZEA (2E)-2-methyl-4-(9H-purin-6-ylamino)but-2-en-1-ol × 1
ZEZ (2Z)-2-methyl-4-(9H-purin-6-ylamino)but-2-en-1-ol × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
LIQUID DIFFUSION;pH 2.5;293 K;counter diffusion under microgravity conditions during JAXA-GCF-flight number 6, pH 2.5, LIQUID DIFFUSION, temperature 293K
|
Resolution 2.49 Å
R-free 0.224
|
|
3O5W
Binding of kinetin in the active site of mistletoe lectin I
Deposited 2010-07-28
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Other combination
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain A
34–287(254 aa)
Chain B
302–564(263 aa)
|
Not recorded
|
SO4 SULFATE ION × 1
NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1
GOL GLYCEROL × 8
H35 N-(FURAN-2-YLMETHYL)-7H-PURIN-6-AMINE × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
COUNTER-DIFFUSION;pH 2.5;293 K;1.0M ammonium sulphate, 0.2M glycine/HCl, pH 2.5, counter diffusion, temperature 293K
|
Resolution 2.70 Å
R-free 0.226
|
|
4JKX
Crystal structure Mistletoe Lectin I from Viscum album in complex with kinetin at 2.35 A resolution.
Deposited 2013-03-12
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Other combination
Homooligomer;Protein × 4
PDB declaration: tetrameric
|
Chain A
34–282(249 aa)
Chain B
302–564(263 aa)
|
Not recorded
|
SO4 SULFATE ION × 10
NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 4
GOL GLYCEROL × 20
H35 N-(FURAN-2-YLMETHYL)-7H-PURIN-6-AMINE × 2
EDO 1,2-ETHANEDIOL × 12
DIO 1,4-DIETHYLENE DIOXIDE × 2
CL CHLORIDE ION × 4
AZI AZIDE ION × 2
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 2.5;293 K;1.0M ammonium sulphate, 0.2M glycine/HCl, pH 2.5, VAPOR DIFFUSION, HANGING DROP, temperature 293.0K
|
Resolution 2.35 Å
R-free 0.248
|
|
4JKX
Crystal structure Mistletoe Lectin I from Viscum album in complex with kinetin at 2.35 A resolution.
Deposited 2013-03-12
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 2
Other combination
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain A
34–282(249 aa)
Chain B
302–564(263 aa)
|
Not recorded
|
SO4 SULFATE ION × 5
NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2
GOL GLYCEROL × 10
H35 N-(FURAN-2-YLMETHYL)-7H-PURIN-6-AMINE × 1
EDO 1,2-ETHANEDIOL × 6
DIO 1,4-DIETHYLENE DIOXIDE × 1
CL CHLORIDE ION × 2
AZI AZIDE ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 2.5;293 K;1.0M ammonium sulphate, 0.2M glycine/HCl, pH 2.5, VAPOR DIFFUSION, HANGING DROP, temperature 293.0K
|
Resolution 2.35 Å
R-free 0.248
|
|
9KX8
Mistletoe Lectin I from Viscum album complexed with epimer form of lactose
Deposited 2024-12-06
|
Different construct
Different mutation/modification
Different oligomeric state
Different ligand/ion
Different experimental conditions
Different structure-quality metrics
|
Assembly 1
Other combination
Homooligomer;Protein × 2
PDB declaration: dimeric
|
Chain A
34–280(247 aa)
Chain B
302–564(263 aa)
|
Not recorded
|
GOL GLYCEROL × 5
NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 3
SO4 SULFATE ION × 3
GLY GLYCINE × 1
CL CHLORIDE ION × 2
NA SODIUM ION × 1
|
X-RAY DIFFRACTION
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 2.5;293 K;0.2M Glycin, 30% AmSO4, 4% Dioxane
|
Resolution 2.28 Å
R-free 0.231
|