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2xji

Structure and Copper-binding Properties of Methanobactins from Methylosinus trichosporium OB3b

Method: X-RAY DIFFRACTION
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1. Protein Identity and Related Structures Protein Identity & Related Structures

METHANOBACTIN MB-OB3B

OrganismNot specified

UniProt E3YBA4

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein monomer Monomer Protein 1 COPPER (II) ION × 1 water × 1 Consistent with protein count
2 Protein monomer Monomer Protein 1 COPPER (II) ION × 1 water × 1 Consistent with protein count
3 Protein monomer Monomer Protein 1 COPPER (II) ION × 1 water × 1 Consistent with protein count
4 Protein monomer Monomer Protein 1 COPPER (II) ION × 1 water × 1 Consistent with protein count
5 Protein monomer Monomer Protein 1 COPPER (II) ION × 1 water × 1 Consistent with protein count
6 Protein monomer Monomer Protein 1 COPPER (II) ION × 1 water × 1 Consistent with protein count
7 Protein homooligomer Homooligomer Protein 2 COPPER (II) ION × 2 water × 2 Consistent with protein count
8 Protein homooligomer Homooligomer Protein 2 COPPER (II) ION × 2 water × 2 Consistent with protein count
9 Protein homooligomer Homooligomer Protein 2 COPPER (II) ION × 2 water × 2 Consistent with protein count

Other States of the Same Protein in the Database

Monomer
2xjh 2xjh 2xji 2xji 2xji 2xji 2xji 2xji

8 assemblies

Homodimer
2xji 2xji 2xji

3 assemblies

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex

None

View Construct and Data Evidence
UniProt name MBCTN_METTR
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A； PDBConstruct 1–11； UniProt 20–30 Author chain B； PDBConstruct 1–11； UniProt 20–30 Author chain C； PDBConstruct 1–11； UniProt 20–30 Author chain D； PDBConstruct 1–11； UniProt 20–30 Author chain E； PDBConstruct 1–11； UniProt 20–30 Author chain F； PDBConstruct 1–11； UniProt 20–30

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id2xji
Deposition date deposition_date2010-07-06
Structure title titleStructure and Copper-binding Properties of Methanobactins from Methylosinus trichosporium OB3b
Keywords keywordsOXIDOREDUCTASE, METAL TRANSPORT, METHANOTROPHS, OXAZALONE; OXIDOREDUCTASE
Experimental Method methodX-RAY DIFFRACTION
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

2xji__assembly_8__model_1

Assembly 8 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

2xji__assembly_8__model_1 | I(q)

10-2 10-1 104 105 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

2xji__assembly_8__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）6.98 Å
Rg (electron density)6.29 Å
Total Rg7.47 Å
Atom count134
Residues14
Excluded volume2406 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 2xji__assembly_1__model_1 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
2 1 2xji__assembly_2__model_1 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
3 1 2xji__assembly_3__model_1 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
4 1 2xji__assembly_4__model_1 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
5 1 2xji__assembly_5__model_1 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
6 1 2xji__assembly_6__model_1 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
7 1 2xji__assembly_7__model_1 dimeric （2） Success 4.1.3-1-20251215 (887e7ef) View Download
8 1 2xji__assembly_8__model_1 dimeric （2） Success 4.1.3-1-20251215 (887e7ef) View Download
9 1 2xji__assembly_9__model_1 dimeric （2） Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (3)

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7. Citations (3)