Bacillus subtilis
| Assembly | 物理组成 | 蛋白状态 | 分子拷贝数 | 共同组分 | 数据核对 |
|---|---|---|---|---|---|
| 1 | 蛋白同源多聚体 | 同源多聚体 | 蛋白 2 | 5-S-METHYL-1-O-PHOSPHONO-5-THIO-D-RIBULOSE × 2 water × 2 | 与蛋白数一致 |
| 2 | 蛋白同源多聚体 | 同源多聚体 | 蛋白 2 | 5-S-METHYL-1-O-PHOSPHONO-5-THIO-D-RIBULOSE × 2 water × 2 | 与蛋白数一致 |
| UniProt名称 | MTNA_BACSU |
| Isoform | — |
| PDB实体 | 1 |
| 链与序列区间 | 作者链 A； PDB构建体 22–374； UniProt 1–353 作者链 B； PDB构建体 22–374； UniProt 1–353 作者链 C； PDB构建体 22–374； UniProt 1–353 作者链 D； PDB构建体 22–374； UniProt 1–353 |
页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中；数据库内部编号、导入时间和 assembly 操作表达式仅用于维护，因此不在读者页面展示。
| 条目编号 entry_id | 2yvk |
| 沉积日期 deposition_date | 2007-04-13 |
| 结构标题 title | Crystal structure of 5-methylthioribose 1-phosphate isomerase product complex from Bacillus subtilis |
| 关键词 keywords | ISOMERASE, METHIONINE SALVAGE PATHWAY; ISOMERASE |
| 实验方法 method | X-RAY DIFFRACTION |
页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。
Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
| Rg（Guinier） | 29.15 Å |
| Rg（电子密度） | 28.65 Å |
| 总 Rg | 29.09 Å |
| 原子数 | 5424 |
| 残基数 | 698 |
| 排除体积 | 96849 ų |
| 最大 q | 0.500 Å⁻¹ |
| 结构域编号 domain_id | 2yvkA01 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 20 — Up-down Bundle |
| 拓扑 Topology topology | 120 — Four Helix Bundle (Hemerythrin (Met), subunit A) |
| 同源超家族 H-superfamily homologous superfamily | 420 — translation initiation factor eif-2b, domain 1 |
| 结构域编号 domain_id | 2yvkA02 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 50 — Rossmann fold |
| 同源超家族 H-superfamily homologous superfamily | 10470 — Translation initiation factor eif-2b; domain 2 |
| 结构域编号 domain_id | 2yvkB01 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 20 — Up-down Bundle |
| 拓扑 Topology topology | 120 — Four Helix Bundle (Hemerythrin (Met), subunit A) |
| 同源超家族 H-superfamily homologous superfamily | 420 — translation initiation factor eif-2b, domain 1 |
| 结构域编号 domain_id | 2yvkB02 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 50 — Rossmann fold |
| 同源超家族 H-superfamily homologous superfamily | 10470 — Translation initiation factor eif-2b; domain 2 |
| 结构域编号 domain_id | 2yvkC01 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 20 — Up-down Bundle |
| 拓扑 Topology topology | 120 — Four Helix Bundle (Hemerythrin (Met), subunit A) |
| 同源超家族 H-superfamily homologous superfamily | 420 — translation initiation factor eif-2b, domain 1 |
| 结构域编号 domain_id | 2yvkC02 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 50 — Rossmann fold |
| 同源超家族 H-superfamily homologous superfamily | 10470 — Translation initiation factor eif-2b; domain 2 |
| 结构域编号 domain_id | 2yvkD01 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 20 — Up-down Bundle |
| 拓扑 Topology topology | 120 — Four Helix Bundle (Hemerythrin (Met), subunit A) |
| 同源超家族 H-superfamily homologous superfamily | 420 — translation initiation factor eif-2b, domain 1 |
| 结构域编号 domain_id | 2yvkD02 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 50 — Rossmann fold |
| 同源超家族 H-superfamily homologous superfamily | 10470 — Translation initiation factor eif-2b; domain 2 |