3caa

CLEAVED ANTICHYMOTRYPSIN A347R

Method: X-RAY DIFFRACTION Dmax: 75.2 Å Quality: GOOD

1. Protein Identity and Related Structures Protein Identity & Related Structures

ANTICHYMOTRYPSIN

Homo sapiens

UniProt P01011

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein homooligomer Homooligomer Protein × 2 PDB declaration: dimeric(2) Consistent with protein copy count Chain A; UniProt 43–383 Chain B; UniProt 387–423 Mutation:A347R No other associated polymer X-RAY DIFFRACTION X-ray crystallization conditions:pH 5.6;10% PEG MONOMETHYLETHER 5000 0.2 M MAGNESIUM ACETATE 0.1 M SODIUM CITRATE PH 5.6 PROTEIN AT 3 MG/ML Resolution 2.40 Å R-free 0.280

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

25 other PDB entries and 30 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name AACT_HUMAN
Isoform
PDB entities 1, 2
Chains and sequence ranges Author chain A; PDBConstruct 1–341; UniProt 43–383 Author chain B; PDBConstruct 1–37; UniProt 387–423

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

SAXS scattering curve SAXS Profile

SAXS profile for 3caa

P(r) Distance Distribution P(r) Distribution

P(r) distribution for 3caa
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2. Structure Basics 2. Structure Basics

Entry ID entry_id3caa
Deposition date deposition_date1997-08-18
Structure title titleCLEAVED ANTICHYMOTRYPSIN A347R
Keywords keywordsSERPIN, SERINE PROTEASE INHIBITOR, ANTICHYMOTRYPSIN; SERPIN
Experimental Method methodX-RAY DIFFRACTION

3. SAXS Parameters (CRYSOL theoretical calculation) 3. SAXS Parameters (CRYSOL)

Radius of gyration Rg (Guinier) rg_guinier22.97
Radius of gyration Rg (electron density) rg_electron21.62
Forward intensity I(0) i027355100.00
Molecular weight molecular_weight41619.0 kDa
Excluded volume excluded_volume52775 ų
Envelope volume envelope_volume61412 ų
Hydration-shell volume shell_volume23842 ų
Envelope diameter envelope_diameter79.3
Shell Rg shell_rg28.40
Envelope Rg envelope_rg21.85
Shape Rg shape_rg21.60
Total Rg total_rg22.55
Total atoms total_atoms2931
Residues n_residues364
Spherical-harmonic order n_harmonics20
q range q_range— – 0.5000 −1
Data points n_points101
Shell type shell_typedirectional
Solvent electron density solvent_density0.3340 e/ų
Shell contrast contrast_shell0.0300 e/ų
CRYSOL version crysol_version4.1.3

4. P(r) Distance Distribution (GNOM inversion) 4. P(r) Analysis (GNOM)

Maximum dimension Dmax dmax75.2
Rg (real space) rg_real22.95
Rg uncertainty (real space) rg_real_error0.53
I(0) (real space) i0_real2.7360e+07
I(0) uncertainty (real space) i0_real_error4.0570e+05
Rg (reciprocal space) rg_reciprocal22.95
I(0) (reciprocal space) i0_reciprocal27360000.0000
Solution quality estimate total_estimate0.8046
Solution quality rating solution_quality GOOD a GOOD solution
P(r) peaks n_peaks2
Primary peak position r_peak_primary27.8
Skewness Skewness skewness0.350
Kurtosis Kurtosis kurtosis-0.311
Angular range angular_range— – 0.3450 −1
Current regularization parameter α current_alpha0.0000
Highest regularization parameter α highest_alpha6868000.0000
Real-space data points n_real_points66
GNOM version gnom_version4.1.3
Quality Criteria quality_criteria AN1: 0.000; Oscil: 0.820; Stabil: 0.999; Sysdev: 1.000; Positv: 1.000; Valcen: 0.998; Smooth: 0.000

5. Crystallography and Experiment 5. Crystallography & Experiment

6. Entities and Polymers Entities & Polymers (3)

7. Fold Classification (SCOP + CATH) 3 domains

SCOP 2.08 (1 domains)

Domain ID domain_idd3caa.1
Class classe — Multi-domain proteins (alpha and beta)
Fold Fold folde.1 — Serpins
Superfamily Superfamily superfamilye.1.1 — Serpins
Family Family familye.1.1.1 — Serpins

CATH v4.4 (2 domains)

Domain ID domain_id3caaA01
Class class2 — Mainly Beta
Architecture architecture30 — Roll
Topology topology39 — Alpha-1-antitrypsin; domain 1
Homologous superfamily homologous superfamily10 — Alpha-1-antitrypsin, domain 1
Domain ID domain_id3caaA02
Class class3 — Alpha Beta
Architecture architecture30 — 2-Layer Sandwich
Topology topology497 — Antithrombin; Chain I, domain 2
Homologous superfamily homologous superfamily10 — Antithrombin, subunit I, domain 2

8. Citations (2)

9. Files and Curves (10)