Haemophilus influenzae
| Assembly | Physical composition | Protein state | Molecular copy count | Associated components | Data consistency |
|---|---|---|---|---|---|
| 1 | Protein monomer | Monomer | Protein 1 | SULFATE ION × 1 BETA-MERCAPTOETHANOL × 1 water × 1 | Consistent with protein count |
| UniProt name | Y1655_HAEIN |
| Isoform | — |
| PDB entities | 1 |
| Chains and sequence ranges | Author chain A； PDBConstruct 2–319； UniProt 256–573 |
The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.
| Entry ID entry_id | 3ckm |
| Deposition date deposition_date | 2008-03-16 |
| Structure title title | LpoA (YraM) C-domain from Haemophilus influenzae, a regulator of PBP1A |
| Keywords keywords | YraM, periplasmic-binding protein, lipoprotein, unliganded, BIOSYNTHETIC PROTEIN, PBP1A, TRANSPEPTIDASE, PEPTIDOGLYCAN; BIOSYNTHETIC PROTEIN |
| Experimental Method method | X-RAY DIFFRACTION |
This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.
Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
| Rg（Guinier） | 21.50 Å |
| Rg (electron density) | 20.57 Å |
| Total Rg | 21.31 Å |
| Atom count | 2442 |
| Residues | 309 |
| Excluded volume | 43357 ų |
| Maximum q | 0.500 Å⁻¹ |
| Domain ID domain_id | d3ckma1 |
| Class class | c — Alpha and beta proteins (a/b) |
| Fold Fold fold | c.93 — Periplasmic binding protein-like I |
| Superfamily Superfamily superfamily | c.93.1 — Periplasmic binding protein-like I |
| Family Family family | c.93.1.1 — L-arabinose binding protein-like |
| Domain ID domain_id | d3ckma2 |
| Class class | l — Artifacts |
| Fold Fold fold | l.1 — Tags |
| Superfamily Superfamily superfamily | l.1.1 — Tags |
| Family Family family | l.1.1.1 — Tags |
| Domain ID domain_id | 3ckmA01 |
| Class class | 3 — Alpha Beta |
| Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| Topology topology | 50 — Rossmann fold |
| Homologous superfamily homologous superfamily | 2300 — Response regulator |
| Domain ID domain_id | 3ckmA02 |
| Class class | 3 — Alpha Beta |
| Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| Topology topology | 50 — Rossmann fold |
| Homologous superfamily homologous superfamily | 2300 — Response regulator |