Photobacterium leiognathi
| Assembly | Physical composition | Protein state | Molecular copy count | Associated components | Data consistency |
|---|---|---|---|---|---|
| 1 | Protein monomer | Monomer | Protein 1 | RIBOFLAVIN × 1 water × 1 | Consistent with protein count |
| UniProt name | LUXP_PHOLE |
| Isoform | — |
| PDB entities | 1 |
| Chains and sequence ranges | Author chain A； PDBConstruct 1–186； UniProt 1–186 |
The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.
| Entry ID entry_id | 3ddy |
| Deposition date deposition_date | 2008-06-07 |
| Structure title title | Structure of lumazine protein, an optical transponder of luminescent bacteria |
| Keywords keywords | Luminescent bacteria, Photobacterium leiognathi, lumazine protein, riboflavin synthase, Luminescence, LUMINESCENT PROTEIN; LUMINESCENT PROTEIN |
| Experimental Method method | X-RAY DIFFRACTION |
This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.
Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
| Rg（Guinier） | 17.06 Å |
| Rg (electron density) | 15.85 Å |
| Total Rg | 16.89 Å |
| Atom count | 1338 |
| Residues | 175 |
| Excluded volume | 23874 ų |
| Maximum q | 0.500 Å⁻¹ |
| Domain ID domain_id | 3ddyA01 |
| Class class | 2 — Mainly Beta |
| Architecture architecture | 40 — Beta Barrel |
| Topology topology | 30 — Elongation Factor Tu (Ef-tu); domain 3 |
| Homologous superfamily homologous superfamily | 20 — |
| Domain ID domain_id | 3ddyA02 |
| Class class | 2 — Mainly Beta |
| Architecture architecture | 40 — Beta Barrel |
| Topology topology | 30 — Elongation Factor Tu (Ef-tu); domain 3 |
| Homologous superfamily homologous superfamily | 20 — |