Arabidopsis thaliana
| Assembly | Physical composition | Protein state | Molecular copy count | Associated components | Data consistency |
|---|---|---|---|---|---|
| 1 | Protein homooligomer | Homooligomer | Protein 4 | CHLORIDE ION × 4 water × 4 | Consistent with protein count |
| UniProt name | Q9LSV0_ARATH |
| Isoform | — |
| PDB entities | 1 |
| Chains and sequence ranges | Author chain A； PDBConstruct 22–310； UniProt 1–289 |
The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.
| Entry ID entry_id | 3doj |
| Deposition date deposition_date | 2008-07-04 |
| Structure title title | Structure of Glyoxylate reductase 1 from Arabidopsis (AtGLYR1) |
| Keywords keywords | Gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase, succinic semialdehyde reductase, OXIDOREDUCTASE; OXIDOREDUCTASE |
| Experimental Method method | X-RAY DIFFRACTION |
This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.
Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
| Rg（Guinier） | 34.56 Å |
| Rg (electron density) | 33.54 Å |
| Total Rg | 34.19 Å |
| Atom count | 8590 |
| Residues | 1168 |
| Excluded volume | 154990 ų |
| Maximum q | 0.500 Å⁻¹ |
| Domain ID domain_id | d3doja1 |
| Class class | c — Alpha and beta proteins (a/b) |
| Fold Fold fold | c.2 — NAD(P)-binding Rossmann-fold domains |
| Superfamily Superfamily superfamily | c.2.1 — NAD(P)-binding Rossmann-fold domains |
| Family Family family | c.2.1.0 — automated matches |
| Domain ID domain_id | d3doja2 |
| Class class | a — All alpha proteins |
| Fold Fold fold | a.100 — 6-phosphogluconate dehydrogenase C-terminal domain-like |
| Superfamily Superfamily superfamily | a.100.1 — 6-phosphogluconate dehydrogenase C-terminal domain-like |
| Family Family family | a.100.1.0 — automated matches |
| Domain ID domain_id | d3doja3 |
| Class class | l — Artifacts |
| Fold Fold fold | l.1 — Tags |
| Superfamily Superfamily superfamily | l.1.1 — Tags |
| Family Family family | l.1.1.1 — Tags |
| Domain ID domain_id | 3dojA01 |
| Class class | 3 — Alpha Beta |
| Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| Topology topology | 50 — Rossmann fold |
| Homologous superfamily homologous superfamily | 720 — NAD(P)-binding Rossmann-like Domain |
| Domain ID domain_id | 3dojA02 |
| Class class | 1 — Mainly Alpha |
| Architecture architecture | 10 — Orthogonal Bundle |
| Topology topology | 1040 — N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 |
| Homologous superfamily homologous superfamily | 10 — N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 |