3h0d
Crystal structure of CtsR in complex with a 26bp DNA duplex
1. 蛋白身份与相关结构 Protein Identity & Related Structures
当前条目没有可用的 UniProt 蛋白身份。
七张关系表仍保留该条目的 assembly 与组成信息,但缺少统一蛋白身份时,不能可靠建立跨 PDB 的同蛋白链接。
当前条目的 assembly 组成
| Assembly | 物理组成 | 蛋白状态 | 蛋白 / DNA / RNA / 其他聚合物 | 数据核对 |
|---|---|---|---|---|
| 1 | 蛋白–DNA | 同源多聚体 | 2 / 2 / 0 / 0 | 与全部聚合物一致 |
页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中;数据库内部编号、导入时间和 assembly 操作表达式仅用于维护,因此不在读者页面展示。
2. 结构基本信息 2. Structure Basics
| 条目编号 entry_id | 3h0d |
| 沉积日期 deposition_date | 2009-04-09 |
| 结构标题 title | Crystal structure of CtsR in complex with a 26bp DNA duplex |
| 关键词 keywords | protein DNA complex, winged HTH domain, 4-helix bundle, DNA tandem repeat, TRANSCRIPTION-DNA COMPLEX; TRANSCRIPTION/DNA |
| 实验方法 method | X-RAY DIFFRACTION |
3. Official assembly/model 理论 SAXS Official SAXS Profiles
页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。
3h0d__assembly_1__model_1
Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
3h0d__assembly_1__model_1 | I(q)
3h0d__assembly_1__model_1 | P(r) · Pending
| Rg(Guinier) | 26.84 Å |
| Rg(电子密度) | 25.62 Å |
| 总 Rg | 26.19 Å |
| 原子数 | 3570 |
| 残基数 | 342 |
| 排除体积 | 61022 ų |
| 最大 q | 0.500 Å⁻¹ |
4. 晶体学与实验 4. Crystallography & Experiment
5. 实体与聚合物信息 Entities & Polymers (5)
6. 折叠分类 (SCOP + CATH) 4 domains
CATH v4.4 (4 domains)
| 结构域编号 domain_id | 3h0dA01 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 56 — Phenylalanyl-tRNA Synthetase; Chain B, domain 1 |
| 同源超家族 H-superfamily homologous superfamily | 130 — Transcriptional regulator CtsR, winged HTH domain |
| 结构域编号 domain_id | 3h0dA02 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 1200 — Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A |
| 同源超家族 H-superfamily homologous superfamily | 150 — Transcriptional repressor of class III stress genes, C-terminal domain |
| 结构域编号 domain_id | 3h0dB01 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 56 — Phenylalanyl-tRNA Synthetase; Chain B, domain 1 |
| 同源超家族 H-superfamily homologous superfamily | 130 — Transcriptional regulator CtsR, winged HTH domain |
| 结构域编号 domain_id | 3h0dB02 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 1200 — Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A |
| 同源超家族 H-superfamily homologous superfamily | 150 — Transcriptional repressor of class III stress genes, C-terminal domain |