Aplysia californica
| Assembly | 物理组成 | 蛋白状态 | 分子拷贝数 | 共同组分 | 数据核对 |
|---|---|---|---|---|---|
| 1 | 蛋白同源多聚体 | 同源多聚体 | 蛋白 2 | ;[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl [(2R,3R,4S)-4-fluoro-3-hydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate ; × 2 | 与蛋白数一致 |
| UniProt名称 | NADA_APLCA |
| Isoform | — |
| PDB实体 | 1 |
| 链与序列区间 | 作者链 A； PDB构建体 1–258； UniProt 25–282 作者链 B； PDB构建体 1–258； UniProt 25–282 |
页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中；数据库内部编号、导入时间和 assembly 操作表达式仅用于维护，因此不在读者页面展示。
| 条目编号 entry_id | 3i9o |
| 沉积日期 deposition_date | 2009-07-12 |
| 结构标题 title | Crystal structure of ADP ribosyl cyclase complexed with ribo-2'F-ADP ribose |
| 关键词 keywords | Homodimer, enzyme-reaction-intermediate complex, ADP-ribosyl cyclase, Disulfide bond, Fertilization, Hydrolase, NAD; HYDROLASE |
| 实验方法 method | X-RAY DIFFRACTION |
页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。
Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
| Rg（Guinier） | 25.76 Å |
| Rg（电子密度） | 24.86 Å |
| 总 Rg | 25.81 Å |
| 原子数 | 4094 |
| 残基数 | 502 |
| 排除体积 | 72748 ų |
| 最大 q | 0.500 Å⁻¹ |
| 结构域编号 domain_id | d3i9oa_ |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.23 — Flavodoxin-like |
| 超家族 Superfamily superfamily | c.23.14 — N-(deoxy)ribosyltransferase-like |
| 家族 Family family | c.23.14.3 — ADP ribosyl cyclase-like |
| 结构域编号 domain_id | d3i9ob_ |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.23 — Flavodoxin-like |
| 超家族 Superfamily superfamily | c.23.14 — N-(deoxy)ribosyltransferase-like |
| 家族 Family family | c.23.14.3 — ADP ribosyl cyclase-like |
| 结构域编号 domain_id | 3i9oA01 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 20 — Up-down Bundle |
| 拓扑 Topology topology | 82 — ADP Ribosyl Cyclase; Chain A, domain 1 |
| 同源超家族 H-superfamily homologous superfamily | 10 — ADP Ribosyl Cyclase; Chain A, domain 1 |
| 结构域编号 domain_id | 3i9oA02 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 50 — Rossmann fold |
| 同源超家族 H-superfamily homologous superfamily | 720 — NAD(P)-binding Rossmann-like Domain |
| 结构域编号 domain_id | 3i9oB01 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 20 — Up-down Bundle |
| 拓扑 Topology topology | 82 — ADP Ribosyl Cyclase; Chain A, domain 1 |
| 同源超家族 H-superfamily homologous superfamily | 10 — ADP Ribosyl Cyclase; Chain A, domain 1 |
| 结构域编号 domain_id | 3i9oB02 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 50 — Rossmann fold |
| 同源超家族 H-superfamily homologous superfamily | 720 — NAD(P)-binding Rossmann-like Domain |