Burkholderia pseudomallei
| Assembly | 物理组成 | 蛋白状态 | 分子拷贝数 | 共同组分 | 数据核对 |
|---|---|---|---|---|---|
| 1 | 蛋白同源多聚体 | 同源多聚体 | 蛋白 3 | ZINC ION × 3 5'-deoxy-5'-[(pyridin-4-ylcarbonyl)amino]cytidine × 3 POTASSIUM ION × 1 water × 3 | 与蛋白数一致 |
| UniProt名称 | ISPF_BURPS |
| Isoform | — |
| PDB实体 | 1 |
| 链与序列区间 | 作者链 A； PDB构建体 22–183； UniProt 1–162 作者链 B； PDB构建体 22–183； UniProt 1–162 作者链 C； PDB构建体 22–183； UniProt 1–162 |
页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中；数据库内部编号、导入时间和 assembly 操作表达式仅用于维护，因此不在读者页面展示。
| 条目编号 entry_id | 3ke1 |
| 沉积日期 deposition_date | 2009-10-23 |
| 结构标题 title | Crystal structure of 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase from Burkholderia pseudomallei in complex with a fragment-nucleoside fusion D000161829 |
| 关键词 keywords | ;NIAID, SSGCID, Seattle Structural Genomics Center for Infectious Disease, fragment crystallography, FBDD, fragment-based drug-design, nucleoside analog, D000161829, Isoprene biosynthesis, Lyase, Metal-binding ;; LYASE |
| 实验方法 method | X-RAY DIFFRACTION |
页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。
Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
| Rg（Guinier） | 20.78 Å |
| Rg（电子密度） | 19.69 Å |
| 总 Rg | 20.50 Å |
| 原子数 | 3327 |
| 残基数 | 444 |
| 排除体积 | 59007 ų |
| 最大 q | 0.500 Å⁻¹ |
| 结构域编号 domain_id | d3ke1a_ |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.79 — Bacillus chorismate mutase-like |
| 超家族 Superfamily superfamily | d.79.5 — IpsF-like |
| 家族 Family family | d.79.5.0 — automated matches |
| 结构域编号 domain_id | d3ke1b_ |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.79 — Bacillus chorismate mutase-like |
| 超家族 Superfamily superfamily | d.79.5 — IpsF-like |
| 家族 Family family | d.79.5.0 — automated matches |
| 结构域编号 domain_id | d3ke1c_ |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.79 — Bacillus chorismate mutase-like |
| 超家族 Superfamily superfamily | d.79.5 — IpsF-like |
| 家族 Family family | d.79.5.0 — automated matches |
| 结构域编号 domain_id | 3ke1A00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 1330 — 60s Ribosomal Protein L30; Chain: A; |
| 同源超家族 H-superfamily homologous superfamily | 50 — 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
| 结构域编号 domain_id | 3ke1B00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 1330 — 60s Ribosomal Protein L30; Chain: A; |
| 同源超家族 H-superfamily homologous superfamily | 50 — 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
| 结构域编号 domain_id | 3ke1C00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 1330 — 60s Ribosomal Protein L30; Chain: A; |
| 同源超家族 H-superfamily homologous superfamily | 50 — 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |