Escherichia coli
| Assembly | 物理组成 | 蛋白状态 | 分子拷贝数 | 共同组分 | 数据核对 |
|---|---|---|---|---|---|
| 1 | 蛋白同源多聚体 | 同源多聚体 | 蛋白 3 | 1,2-ETHANEDIOL × 4 SULFITE ION × 2 SULFATE ION × 5 water × 3 | 与蛋白数一致 |
| UniProt名称 | YGBT_ECOLI |
| Isoform | — |
| PDB实体 | 1 |
| 链与序列区间 | 作者链 A； PDB构建体 1–200； UniProt 92–291 作者链 B； PDB构建体 1–200； UniProt 92–291 作者链 C； PDB构建体 1–200； UniProt 92–291 |
页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中；数据库内部编号、导入时间和 assembly 操作表达式仅用于维护，因此不在读者页面展示。
| 条目编号 entry_id | 3nke |
| 沉积日期 deposition_date | 2010-06-18 |
| 结构标题 title | High resolution structure of the C-terminal domain CRISP-associated protein Cas1 from Escherichia coli str. K-12 |
| 关键词 keywords | CRISPR, Cas1, YgbT, Nuclease, DNA recombination, DNA repair, IMMUNE SYSTEM; IMMUNE SYSTEM |
| 实验方法 method | X-RAY DIFFRACTION |
页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。
Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
| Rg（Guinier） | 25.77 Å |
| Rg（电子密度） | 24.39 Å |
| 总 Rg | 25.31 Å |
| 原子数 | 4284 |
| 残基数 | 545 |
| 排除体积 | 76721 ų |
| 最大 q | 0.500 Å⁻¹ |
| 结构域编号 domain_id | d3nkea_ |
| 类 Class class | e — Multi-domain proteins (alpha and beta) |
| 折叠类型 Fold fold | e.79 — CRISPR associated protein Cas1-like |
| 超家族 Superfamily superfamily | e.79.1 — CRISPR associated protein Cas1-like |
| 家族 Family family | e.79.1.1 — CRISPR associated protein Cas1-like |
| 结构域编号 domain_id | d3nkeb_ |
| 类 Class class | e — Multi-domain proteins (alpha and beta) |
| 折叠类型 Fold fold | e.79 — CRISPR associated protein Cas1-like |
| 超家族 Superfamily superfamily | e.79.1 — CRISPR associated protein Cas1-like |
| 家族 Family family | e.79.1.1 — CRISPR associated protein Cas1-like |
| 结构域编号 domain_id | d3nkec_ |
| 类 Class class | e — Multi-domain proteins (alpha and beta) |
| 折叠类型 Fold fold | e.79 — CRISPR associated protein Cas1-like |
| 超家族 Superfamily superfamily | e.79.1 — CRISPR associated protein Cas1-like |
| 家族 Family family | e.79.1.1 — CRISPR associated protein Cas1-like |
| 结构域编号 domain_id | 3nkeA00 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 20 — Up-down Bundle |
| 拓扑 Topology topology | 120 — Four Helix Bundle (Hemerythrin (Met), subunit A) |
| 同源超家族 H-superfamily homologous superfamily | 920 — CRISPR-associated endonuclease Cas1, C-terminal domain |
| 结构域编号 domain_id | 3nkeB00 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 20 — Up-down Bundle |
| 拓扑 Topology topology | 120 — Four Helix Bundle (Hemerythrin (Met), subunit A) |
| 同源超家族 H-superfamily homologous superfamily | 920 — CRISPR-associated endonuclease Cas1, C-terminal domain |
| 结构域编号 domain_id | 3nkeC00 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 20 — Up-down Bundle |
| 拓扑 Topology topology | 120 — Four Helix Bundle (Hemerythrin (Met), subunit A) |
| 同源超家族 H-superfamily homologous superfamily | 920 — CRISPR-associated endonuclease Cas1, C-terminal domain |