Archaeoglobus fulgidus
| Assembly | 物理组成 | 蛋白状态 | 分子拷贝数 | 共同组分 | 数据核对 |
|---|---|---|---|---|---|
| 1 | 蛋白异源复合物 | 异源复合物 | 蛋白 6 | Ribonuclease HII × 3 （O29634） | 与蛋白数一致 |
| UniProt名称 | PCNA_ARCFU |
| Isoform | — |
| PDB实体 | 1 |
| 链与序列区间 | 作者链 A； PDB构建体 1–245； UniProt 1–245 作者链 B； PDB构建体 1–245； UniProt 1–245 作者链 C； PDB构建体 1–245； UniProt 1–245 |
Archaeoglobus fulgidus
| Assembly | 物理组成 | 蛋白状态 | 分子拷贝数 | 共同组分 | 数据核对 |
|---|---|---|---|---|---|
| 1 | 蛋白异源复合物 | 异源复合物 | 蛋白 6 | DNA polymerase sliding clamp × 3 （O29912） | 与蛋白数一致 |
| UniProt名称 | RNH2_ARCFU |
| Isoform | — |
| PDB实体 | 2 |
| 链与序列区间 | 作者链 D； PDB构建体 13–217； UniProt 1–205 作者链 E； PDB构建体 13–217； UniProt 1–205 作者链 F； PDB构建体 13–217； UniProt 1–205 |
页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中；数据库内部编号、导入时间和 assembly 操作表达式仅用于维护，因此不在读者页面展示。
| 条目编号 entry_id | 3p83 |
| 沉积日期 deposition_date | 2010-10-13 |
| 结构标题 title | Structure of the PCNA:RNase HII complex from Archaeoglobus fulgidus. |
| 关键词 keywords | DNA clamp, RNase H fold, cleaves RNA/DNA hybrids, nucleus, HYDROLASE-DNA BINDING PROTEIN complex; HYDROLASE/DNA BINDING PROTEIN |
| 实验方法 method | X-RAY DIFFRACTION |
页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。
Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
| Rg（Guinier） | 36.04 Å |
| Rg（电子密度） | 35.06 Å |
| 总 Rg | 35.63 Å |
| 原子数 | 10465 |
| 残基数 | 1351 |
| 排除体积 | 188040 ų |
| 最大 q | 0.500 Å⁻¹ |
| 结构域编号 domain_id | d3p83a1 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.131 — DNA clamp |
| 超家族 Superfamily superfamily | d.131.1 — DNA clamp |
| 家族 Family family | d.131.1.2 — DNA polymerase processivity factor |
| 结构域编号 domain_id | d3p83a2 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.131 — DNA clamp |
| 超家族 Superfamily superfamily | d.131.1 — DNA clamp |
| 家族 Family family | d.131.1.2 — DNA polymerase processivity factor |
| 结构域编号 domain_id | d3p83b1 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.131 — DNA clamp |
| 超家族 Superfamily superfamily | d.131.1 — DNA clamp |
| 家族 Family family | d.131.1.2 — DNA polymerase processivity factor |
| 结构域编号 domain_id | d3p83b2 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.131 — DNA clamp |
| 超家族 Superfamily superfamily | d.131.1 — DNA clamp |
| 家族 Family family | d.131.1.2 — DNA polymerase processivity factor |
| 结构域编号 domain_id | d3p83c1 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.131 — DNA clamp |
| 超家族 Superfamily superfamily | d.131.1 — DNA clamp |
| 家族 Family family | d.131.1.2 — DNA polymerase processivity factor |
| 结构域编号 domain_id | d3p83c2 |
| 类 Class class | d — Alpha and beta proteins (a+b) |
| 折叠类型 Fold fold | d.131 — DNA clamp |
| 超家族 Superfamily superfamily | d.131.1 — DNA clamp |
| 家族 Family family | d.131.1.2 — DNA polymerase processivity factor |
| 结构域编号 domain_id | d3p83d1 |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.55 — Ribonuclease H-like motif |
| 超家族 Superfamily superfamily | c.55.3 — Ribonuclease H-like |
| 家族 Family family | c.55.3.0 — automated matches |
| 结构域编号 domain_id | d3p83d2 |
| 类 Class class | l — Artifacts |
| 折叠类型 Fold fold | l.1 — Tags |
| 超家族 Superfamily superfamily | l.1.1 — Tags |
| 家族 Family family | l.1.1.1 — Tags |
| 结构域编号 domain_id | d3p83e1 |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.55 — Ribonuclease H-like motif |
| 超家族 Superfamily superfamily | c.55.3 — Ribonuclease H-like |
| 家族 Family family | c.55.3.0 — automated matches |
| 结构域编号 domain_id | d3p83e2 |
| 类 Class class | l — Artifacts |
| 折叠类型 Fold fold | l.1 — Tags |
| 超家族 Superfamily superfamily | l.1.1 — Tags |
| 家族 Family family | l.1.1.1 — Tags |
| 结构域编号 domain_id | d3p83f_ |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.55 — Ribonuclease H-like motif |
| 超家族 Superfamily superfamily | c.55.3 — Ribonuclease H-like |
| 家族 Family family | c.55.3.0 — automated matches |
| 结构域编号 domain_id | 3p83A00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 70 — Box |
| 拓扑 Topology topology | 10 — Proliferating Cell Nuclear Antigen |
| 同源超家族 H-superfamily homologous superfamily | 10 — |
| 结构域编号 domain_id | 3p83B00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 70 — Box |
| 拓扑 Topology topology | 10 — Proliferating Cell Nuclear Antigen |
| 同源超家族 H-superfamily homologous superfamily | 10 — |
| 结构域编号 domain_id | 3p83C00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 70 — Box |
| 拓扑 Topology topology | 10 — Proliferating Cell Nuclear Antigen |
| 同源超家族 H-superfamily homologous superfamily | 10 — |
| 结构域编号 domain_id | 3p83D00 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 420 — Nucleotidyltransferase; domain 5 |
| 同源超家族 H-superfamily homologous superfamily | 10 — Ribonuclease H-like superfamily/Ribonuclease H |
| 结构域编号 domain_id | 3p83E01 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 420 — Nucleotidyltransferase; domain 5 |
| 同源超家族 H-superfamily homologous superfamily | 10 — Ribonuclease H-like superfamily/Ribonuclease H |
| 结构域编号 domain_id | 3p83E02 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 10 — Arc Repressor Mutant, subunit A |
| 同源超家族 H-superfamily homologous superfamily | 460 — Ribonuclease hii. Domain 2 |
| 结构域编号 domain_id | 3p83F01 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 30 — 2-Layer Sandwich |
| 拓扑 Topology topology | 420 — Nucleotidyltransferase; domain 5 |
| 同源超家族 H-superfamily homologous superfamily | 10 — Ribonuclease H-like superfamily/Ribonuclease H |
| 结构域编号 domain_id | 3p83F02 |
| 类 Class class | 1 — Mainly Alpha |
| 架构 Architecture architecture | 10 — Orthogonal Bundle |
| 拓扑 Topology topology | 10 — Arc Repressor Mutant, subunit A |
| 同源超家族 H-superfamily homologous superfamily | 460 — Ribonuclease hii. Domain 2 |