4aml

CRYSTAL STRUCTURE OF WHEAT GERM AGGLUTININ ISOLECTIN 1 IN COMPLEX WITH GLYCOSYLURETHAN

Method: X-RAY DIFFRACTION
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1. 蛋白身份与相关结构 Protein Identity & Related Structures

AGGLUTININ ISOLECTIN 1

物种未注明

UniProt P10968

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白同源多聚体 同源多聚体 蛋白 2 2-acetamido-2-deoxy-1-O-(propylcarbamoyl)-alpha-D-glucopyranose × 4 GLYCEROL × 2 water × 2 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 AGI1_WHEAT
Isoform —
PDB实体 1
链与序列区间 作者链 A; PDB构建体 1–171; UniProt 27–197 作者链 B; PDB构建体 1–171; UniProt 27–197

页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中;数据库内部编号、导入时间和 assembly 操作表达式仅用于维护,因此不在读者页面展示。

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2. 结构基本信息 2. Structure Basics

条目编号 entry_id4aml
沉积日期 deposition_date2012-03-12
结构标题 titleCRYSTAL STRUCTURE OF WHEAT GERM AGGLUTININ ISOLECTIN 1 IN COMPLEX WITH GLYCOSYLURETHAN
关键词 keywords;SUGAR BINDING PROTEIN, SYNTHETIC CARBOHYDRATE LIGAND, PROTEIN CARBOHYDRATE INTERACTION, LECTIN, CHITIN-BINDING, CARBOHYDRATE BINDING PROTEIN ;; SUGAR BINDING PROTEIN
实验方法 methodX-RAY DIFFRACTION
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3. Official assembly/model 理论 SAXS Official SAXS Profiles

页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。

4aml__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

下载该曲线 .dat

4aml__assembly_1__model_1 | I(q)

10-2 10-1 105 106 107 q (1/Angstrom) I(q)
100 个绘图点;横轴和纵轴均采用对数尺度。

4aml__assembly_1__model_1 | P(r) · Pending

新版 assembly/model P(r) 尚未计算 此处仅保留位置,不展示旧数据 r (Angstrom) P(r)
P(r) 将按相同 assembly/model 分别计算和展示。
Rg(Guinier)20.81 Å
Rg(电子密度)20.37 Å
总 Rg20.94 Å
原子数2425
残基数339
排除体积41453 ų
最大 q0.500 Å⁻¹
Assembly Model 结构单元 聚集说明 状态 CRYSOL 操作
1 1 4aml__assembly_1__model_1 dimeric (2) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
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4. 晶体学与实验 4. Crystallography & Experiment

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5. 实体与聚合物信息 Entities & Polymers (4)

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6. 折叠分类 (SCOP + CATH) 16 domains

SCOP 2.08 (8 domains)

结构域编号 domain_idd4amla1
类 Class classg — Small proteins
折叠类型 Fold foldg.3 — Knottins (small inhibitors, toxins, lectins)
超家族 Superfamily superfamilyg.3.1 — Plant lectins/antimicrobial peptides
家族 Family familyg.3.1.1 — Hevein-like agglutinin (lectin) domain
结构域编号 domain_idd4amla2
类 Class classg — Small proteins
折叠类型 Fold foldg.3 — Knottins (small inhibitors, toxins, lectins)
超家族 Superfamily superfamilyg.3.1 — Plant lectins/antimicrobial peptides
家族 Family familyg.3.1.1 — Hevein-like agglutinin (lectin) domain
结构域编号 domain_idd4amla3
类 Class classg — Small proteins
折叠类型 Fold foldg.3 — Knottins (small inhibitors, toxins, lectins)
超家族 Superfamily superfamilyg.3.1 — Plant lectins/antimicrobial peptides
家族 Family familyg.3.1.1 — Hevein-like agglutinin (lectin) domain
结构域编号 domain_idd4amla4
类 Class classg — Small proteins
折叠类型 Fold foldg.3 — Knottins (small inhibitors, toxins, lectins)
超家族 Superfamily superfamilyg.3.1 — Plant lectins/antimicrobial peptides
家族 Family familyg.3.1.1 — Hevein-like agglutinin (lectin) domain
结构域编号 domain_idd4amlb1
类 Class classg — Small proteins
折叠类型 Fold foldg.3 — Knottins (small inhibitors, toxins, lectins)
超家族 Superfamily superfamilyg.3.1 — Plant lectins/antimicrobial peptides
家族 Family familyg.3.1.1 — Hevein-like agglutinin (lectin) domain
结构域编号 domain_idd4amlb2
类 Class classg — Small proteins
折叠类型 Fold foldg.3 — Knottins (small inhibitors, toxins, lectins)
超家族 Superfamily superfamilyg.3.1 — Plant lectins/antimicrobial peptides
家族 Family familyg.3.1.1 — Hevein-like agglutinin (lectin) domain
结构域编号 domain_idd4amlb3
类 Class classg — Small proteins
折叠类型 Fold foldg.3 — Knottins (small inhibitors, toxins, lectins)
超家族 Superfamily superfamilyg.3.1 — Plant lectins/antimicrobial peptides
家族 Family familyg.3.1.1 — Hevein-like agglutinin (lectin) domain
结构域编号 domain_idd4amlb4
类 Class classg — Small proteins
折叠类型 Fold foldg.3 — Knottins (small inhibitors, toxins, lectins)
超家族 Superfamily superfamilyg.3.1 — Plant lectins/antimicrobial peptides
家族 Family familyg.3.1.1 — Hevein-like agglutinin (lectin) domain

CATH v4.4 (8 domains)

结构域编号 domain_id4amlA01
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology60 — Wheat Germ Agglutinin (Isolectin 2); domain 1
同源超家族 H-superfamily homologous superfamily10 — Endochitinase-like
结构域编号 domain_id4amlA02
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology60 — Wheat Germ Agglutinin (Isolectin 2); domain 1
同源超家族 H-superfamily homologous superfamily10 — Endochitinase-like
结构域编号 domain_id4amlA03
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology60 — Wheat Germ Agglutinin (Isolectin 2); domain 1
同源超家族 H-superfamily homologous superfamily10 — Endochitinase-like
结构域编号 domain_id4amlA04
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology60 — Wheat Germ Agglutinin (Isolectin 2); domain 1
同源超家族 H-superfamily homologous superfamily10 — Endochitinase-like
结构域编号 domain_id4amlB01
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology60 — Wheat Germ Agglutinin (Isolectin 2); domain 1
同源超家族 H-superfamily homologous superfamily10 — Endochitinase-like
结构域编号 domain_id4amlB02
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology60 — Wheat Germ Agglutinin (Isolectin 2); domain 1
同源超家族 H-superfamily homologous superfamily10 — Endochitinase-like
结构域编号 domain_id4amlB03
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology60 — Wheat Germ Agglutinin (Isolectin 2); domain 1
同源超家族 H-superfamily homologous superfamily10 — Endochitinase-like
结构域编号 domain_id4amlB04
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology60 — Wheat Germ Agglutinin (Isolectin 2); domain 1
同源超家族 H-superfamily homologous superfamily10 — Endochitinase-like
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