4f2d

Crystal Structure of Escherichia coli L-arabinose Isomerase (ECAI) complexed with Ribitol

Method: X-RAY DIFFRACTION
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1. 蛋白身份与相关结构 Protein Identity & Related Structures

L-arabinose isomerase

Escherichia coli

UniProt P08202

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白同源多聚体 同源多聚体 蛋白 6 MANGANESE (II) ION × 6 D-ribitol × 6 ACETIC ACID × 2 water × 6 与蛋白数一致
2 蛋白同源多聚体 同源多聚体 蛋白 3 MANGANESE (II) ION × 3 D-ribitol × 3 ACETIC ACID × 1 water × 3 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 ARAA_ECOLI
Isoform —
PDB实体 1
链与序列区间 作者链 A; PDB构建体 1–500; UniProt 1–500 作者链 B; PDB构建体 1–500; UniProt 1–500 作者链 C; PDB构建体 1–500; UniProt 1–500

页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中;数据库内部编号、导入时间和 assembly 操作表达式仅用于维护,因此不在读者页面展示。

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2. 结构基本信息 2. Structure Basics

条目编号 entry_id4f2d
沉积日期 deposition_date2012-05-07
结构标题 titleCrystal Structure of Escherichia coli L-arabinose Isomerase (ECAI) complexed with Ribitol
关键词 keywords;Structural Genomics, PSI-1, Protein Structure Initiative, New York SGX Research Center for Structural Genomics, NYSGXRC, ISOMERASE, Sugar Binding ;; ISOMERASE
实验方法 methodX-RAY DIFFRACTION
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3. Official assembly/model 理论 SAXS Official SAXS Profiles

页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。

4f2d__assembly_2__model_1

Assembly 2 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

下载该曲线 .dat

4f2d__assembly_2__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 个绘图点;横轴和纵轴均采用对数尺度。

4f2d__assembly_2__model_1 | P(r) · Pending

新版 assembly/model P(r) 尚未计算 此处仅保留位置,不展示旧数据 r (Angstrom) P(r)
P(r) 将按相同 assembly/model 分别计算和展示。
Rg(Guinier)38.59 Å
Rg(电子密度)37.95 Å
总 Rg38.26 Å
原子数11559
残基数1443
排除体积204870 ų
最大 q0.500 Å⁻¹
Assembly Model 结构单元 聚集说明 状态 CRYSOL 操作
1 1 4f2d__assembly_1__model_1 hexameric (6) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
2 1 4f2d__assembly_2__model_1 trimeric (3) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
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4. 晶体学与实验 4. Crystallography & Experiment

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5. 实体与聚合物信息 Entities & Polymers (5)

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6. 折叠分类 (SCOP + CATH) 9 domains

SCOP 2.08 (6 domains)

结构域编号 domain_idd4f2da1
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.85 — FucI/AraA N-terminal and middle domains
超家族 Superfamily superfamilyc.85.1 — FucI/AraA N-terminal and middle domains
家族 Family familyc.85.1.2 — AraA N-terminal and middle domain-like
结构域编号 domain_idd4f2da2
类 Class classb — All beta proteins
折叠类型 Fold foldb.43 — Reductase/isomerase/elongation factor common domain
超家族 Superfamily superfamilyb.43.2 — FucI/AraA C-terminal domain-like
家族 Family familyb.43.2.0 — automated matches
结构域编号 domain_idd4f2db1
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.85 — FucI/AraA N-terminal and middle domains
超家族 Superfamily superfamilyc.85.1 — FucI/AraA N-terminal and middle domains
家族 Family familyc.85.1.2 — AraA N-terminal and middle domain-like
结构域编号 domain_idd4f2db2
类 Class classb — All beta proteins
折叠类型 Fold foldb.43 — Reductase/isomerase/elongation factor common domain
超家族 Superfamily superfamilyb.43.2 — FucI/AraA C-terminal domain-like
家族 Family familyb.43.2.0 — automated matches
结构域编号 domain_idd4f2dc1
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.85 — FucI/AraA N-terminal and middle domains
超家族 Superfamily superfamilyc.85.1 — FucI/AraA N-terminal and middle domains
家族 Family familyc.85.1.2 — AraA N-terminal and middle domain-like
结构域编号 domain_idd4f2dc2
类 Class classb — All beta proteins
折叠类型 Fold foldb.43 — Reductase/isomerase/elongation factor common domain
超家族 Superfamily superfamilyb.43.2 — FucI/AraA C-terminal domain-like
家族 Family familyb.43.2.0 — automated matches

CATH v4.4 (3 domains)

结构域编号 domain_id4f2dA01
类 Class class3 — Alpha Beta
架构 Architecture architecture40 — 3-Layer(aba) Sandwich
拓扑 Topology topology50 — Rossmann fold
同源超家族 H-superfamily homologous superfamily10940 —
结构域编号 domain_id4f2dB01
类 Class class3 — Alpha Beta
架构 Architecture architecture40 — 3-Layer(aba) Sandwich
拓扑 Topology topology50 — Rossmann fold
同源超家族 H-superfamily homologous superfamily10940 —
结构域编号 domain_id4f2dC01
类 Class class3 — Alpha Beta
架构 Architecture architecture40 — 3-Layer(aba) Sandwich
拓扑 Topology topology50 — Rossmann fold
同源超家族 H-superfamily homologous superfamily10940 —
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7. 引用文献 (1)