4ind

The Triple Jelly Roll Fold and Turret Assembly in an Archaeal Virus

Method: X-RAY DIFFRACTION

▼

1. 蛋白身份与相关结构 Protein Identity & Related Structures

C381 turret protein

Sulfolobus turreted icosahedral virus

当前结构中的状态

Assembly	物理组成	蛋白状态	分子拷贝数	共同组分	数据核对
1	蛋白同源多聚体	同源多聚体	蛋白 5	DIHYDROGENPHOSPHATE ION × 15 water × 5	与蛋白数一致
2	蛋白同源多聚体	同源多聚体	蛋白 5	DIHYDROGENPHOSPHATE ION × 15 water × 5	与蛋白数一致
3	蛋白同源多聚体	同源多聚体	蛋白 5	DIHYDROGENPHOSPHATE ION × 15 water × 5	与蛋白数一致
4	蛋白同源多聚体	同源多聚体	蛋白 5	DIHYDROGENPHOSPHATE ION × 15 water × 5	与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据

UniProt名称	Q6Q0L3_9VIRU
Isoform	—
PDB实体	1
链与序列区间	作者链 A； PDB构建体 1–381； UniProt 1–381 作者链 B； PDB构建体 1–381； UniProt 1–381 作者链 C； PDB构建体 1–381； UniProt 1–381 作者链 D； PDB构建体 1–381； UniProt 1–381 作者链 E； PDB构建体 1–381； UniProt 1–381 作者链 F； PDB构建体 1–381； UniProt 1–381 作者链 G； PDB构建体 1–381； UniProt 1–381 作者链 H； PDB构建体 1–381； UniProt 1–381 作者链 I； PDB构建体 1–381； UniProt 1–381 作者链 J； PDB构建体 1–381； UniProt 1–381 作者链 K； PDB构建体 1–381； UniProt 1–381 作者链 L； PDB构建体 1–381； UniProt 1–381 作者链 M； PDB构建体 1–381； UniProt 1–381 作者链 N； PDB构建体 1–381； UniProt 1–381 作者链 O； PDB构建体 1–381； UniProt 1–381 作者链 P； PDB构建体 1–381； UniProt 1–381 作者链 Q； PDB构建体 1–381； UniProt 1–381 作者链 R； PDB构建体 1–381； UniProt 1–381 作者链 S； PDB构建体 1–381； UniProt 1–381 作者链 T； PDB构建体 1–381； UniProt 1–381

页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。链映射与序列区间收在“数据证据”中；数据库内部编号、导入时间和 assembly 操作表达式仅用于维护，因此不在读者页面展示。

▼

2. 结构基本信息 2. Structure Basics

条目编号 entry_id	4ind
沉积日期 deposition_date	2013-01-04
结构标题 title	The Triple Jelly Roll Fold and Turret Assembly in an Archaeal Virus
关键词 keywords	STIV, jelly roll, turret, archaeal virus, C381, Sulfolobus turreted icosahedral virus, VIRAL PROTEIN; VIRAL PROTEIN
实验方法 method	X-RAY DIFFRACTION

▼

3. Official assembly/model 理论 SAXS Official SAXS Profiles

页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。

4ind__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

下载该曲线 .dat

4ind__assembly_1__model_1 | I(q)

100 个绘图点；横轴和纵轴均采用对数尺度。

4ind__assembly_1__model_1 | P(r) · Pending

P(r) 将按相同 assembly/model 分别计算和展示。

Rg（Guinier）	37.28 Å
Rg（电子密度）	36.46 Å
总 Rg	37.03 Å
原子数	14690
残基数	1885
排除体积	262240 Å³
最大 q	0.500 Å⁻¹

Assembly	Model	结构单元	聚集说明	状态	CRYSOL	操作
1	1	`4ind__assembly_1__model_1`	pentameric （5）	成功	4.1.3-1-20251215 (887e7ef)	查看下载
2	1	`4ind__assembly_2__model_1`	pentameric （5）	成功	4.1.3-1-20251215 (887e7ef)	查看下载
3	1	`4ind__assembly_3__model_1`	pentameric （5）	成功	4.1.3-1-20251215 (887e7ef)	查看下载
4	1	`4ind__assembly_4__model_1`	pentameric （5）	成功	4.1.3-1-20251215 (887e7ef)	查看下载

▶

4. 晶体学与实验 4. Crystallography & Experiment

▶

5. 实体与聚合物信息 Entities & Polymers (3)

实体 1 Entity 1 polymer

描述 description	C381 turret protein
分子量 formula_weight	42535.7 kDa
来源方法 src_method	man
拷贝数 entity_count	20

聚合物 Polymer

聚合物类型 type	polypeptide(L)
链编号 strand_id	A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T
原子数 atom_count	64220

MSVTTLGQSFPANAKVKYYYKLSEKQDLDAFVNSIFVGSYKLKQISYLLYGNTKIVSAPVVPLGPNASIIIDDELQEGLYLIRIKVYNTNSFSVTVTPFFNNNNTMTYSIGANSEFEIYDIFTKEQGNIYYIQLPPGLAILEFSLERVFEKGNRINIPKIIHTSGNGYISFRLRKGTYAIKMPYSYNNTTSTTFTNFQFGTISTSVATIPLVISSIPANGSGSGTFLVYLKITGDYEDVKFSVTYGGGLGVPFTFGLEVEEINELVENTNFVTQSVTLSGSQVTQSILNVQGSGSHLRLKYASVSGLTTAVTQCQLQATNLNRSTTYSTVWDFIAGGSSTPPSWDIREINSIQLVANGGSSTSSVTITLILVYEQIAGELSHHHHHH

来源 Source

来源生物 organism	Sulfolobus turreted icosahedral virus
通用名 common_name	STIV
NCBI 分类编号 ncbi_taxonomy_id	269145
宿主生物 host_organism	Escherichia coli

实体 2 Entity 2 non-polymer

描述 description	DIHYDROGENPHOSPHATE ION
分子量 formula_weight	97.0 kDa
来源方法 src_method	syn
拷贝数 entity_count	60

实体 3 Entity 3 water

描述 description	water
分子量 formula_weight	18.0 kDa
来源方法 src_method	nat
拷贝数 entity_count	4520

▼

6. 折叠分类 (SCOP + CATH) 60 domains

CATH v4.4 (60 domains)

结构域编号 domain_id	4indA01
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1320 —

结构域编号 domain_id	4indA02
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1310 —

结构域编号 domain_id	4indA03
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1330 —

结构域编号 domain_id	4indB01
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1320 —

结构域编号 domain_id	4indB02
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1310 —

结构域编号 domain_id	4indB03
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1330 —

结构域编号 domain_id	4indC01
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1320 —

结构域编号 domain_id	4indC02
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1310 —

结构域编号 domain_id	4indC03
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1330 —

结构域编号 domain_id	4indD01
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1320 —

结构域编号 domain_id	4indD02
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1310 —

结构域编号 domain_id	4indD03
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1330 —

结构域编号 domain_id	4indE01
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1320 —

结构域编号 domain_id	4indE02
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1310 —

结构域编号 domain_id	4indE03
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1330 —

结构域编号 domain_id	4indF01
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1320 —

结构域编号 domain_id	4indF02
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1310 —

结构域编号 domain_id	4indF03
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1330 —

结构域编号 domain_id	4indG01
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1320 —

结构域编号 domain_id	4indG02
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1310 —

结构域编号 domain_id	4indG03
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1330 —

结构域编号 domain_id	4indH01
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1320 —

结构域编号 domain_id	4indH02
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1310 —

结构域编号 domain_id	4indH03
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1330 —

结构域编号 domain_id	4indI01
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1320 —

结构域编号 domain_id	4indI02
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1310 —

结构域编号 domain_id	4indI03
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1330 —

结构域编号 domain_id	4indJ01
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1320 —

结构域编号 domain_id	4indJ02
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1310 —

结构域编号 domain_id	4indJ03
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1330 —

结构域编号 domain_id	4indK01
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1320 —

结构域编号 domain_id	4indK02
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1310 —

结构域编号 domain_id	4indK03
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1330 —

结构域编号 domain_id	4indL01
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1320 —

结构域编号 domain_id	4indL02
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1310 —

结构域编号 domain_id	4indL03
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1330 —

结构域编号 domain_id	4indM01
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1320 —

结构域编号 domain_id	4indM02
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1310 —

结构域编号 domain_id	4indM03
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1330 —

结构域编号 domain_id	4indN01
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1320 —

结构域编号 domain_id	4indN02
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1310 —

结构域编号 domain_id	4indN03
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1330 —

结构域编号 domain_id	4indO01
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1320 —

结构域编号 domain_id	4indO02
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1310 —

结构域编号 domain_id	4indO03
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1330 —

结构域编号 domain_id	4indP01
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1320 —

结构域编号 domain_id	4indP02
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1310 —

结构域编号 domain_id	4indP03
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1330 —

结构域编号 domain_id	4indQ01
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1320 —

结构域编号 domain_id	4indQ02
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1310 —

结构域编号 domain_id	4indQ03
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1330 —

结构域编号 domain_id	4indR01
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1320 —

结构域编号 domain_id	4indR02
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1310 —

结构域编号 domain_id	4indR03
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1330 —

结构域编号 domain_id	4indS01
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1320 —

结构域编号 domain_id	4indS02
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1310 —

结构域编号 domain_id	4indS03
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1330 —

结构域编号 domain_id	4indT01
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1320 —

结构域编号 domain_id	4indT02
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1310 —

结构域编号 domain_id	4indT03
类 Class class	2 — Mainly Beta
架构 Architecture architecture	60 — Sandwich
拓扑 Topology topology	120 — Jelly Rolls
同源超家族 H-superfamily homologous superfamily	1330 —

▶

晶胞边长 a length_a	81.774 Å
晶胞边长 b length_b	166.999 Å
晶胞边长 c length_c	186.975 Å
晶胞夹角 α angle_alpha	81.84 °
晶胞夹角 β angle_beta	82.17 °
晶胞夹角 γ angle_gamma	81.44 °
晶胞分子数 Z z_pdb	20

空间群 space_group	P 1
空间群编号 int_tables_number	1
晶系 crystal_system	—

分辨率 resolution	1.800 Å
最低分辨率 resolution_low	39.186 Å
R 因子 r_factor	0.1898
R_work r_work	0.1883
R_free r_free	0.2166

The Triple Jelly Roll Fold and Turret Assembly in an Archaeal Virus

1. 蛋白身份与相关结构 Protein Identity & Related Structures

C381 turret protein

当前结构中的状态

数据库中的同蛋白其他状态

2. 结构基本信息 2. Structure Basics

3. Official assembly/model 理论 SAXS Official SAXS Profiles

4ind__assembly_1__model_1

4ind__assembly_1__model_1 | I(q)

4ind__assembly_1__model_1 | P(r) · Pending

4. 晶体学与实验 4. Crystallography & Experiment

晶胞参数 Unit Cell

对称性 Symmetry

精修参数 Refinement

5. 实体与聚合物信息 Entities & Polymers (3)

实体 1 Entity 1 polymer

聚合物 Polymer

来源 Source

实体 2 Entity 2 non-polymer

实体 3 Entity 3 water

6. 折叠分类 (SCOP + CATH) 60 domains

CATH v4.4 (60 domains)

7. 引用文献 (1)

The Triple Jelly Roll Fold and Turret Assembly in an Archaeal Virus

1. 蛋白身份与相关结构 Protein Identity & Related Structures

C381 turret protein

当前结构中的状态

数据库中的同蛋白其他状态

单体

同源二聚体

同源四聚体

其他同源多聚体

异源或核酸复合物

2. 结构基本信息 2. Structure Basics

3. Official assembly/model 理论 SAXS Official SAXS Profiles

4ind__assembly_1__model_1

4ind__assembly_1__model_1 | I(q)

4ind__assembly_1__model_1 | P(r) · Pending

4. 晶体学与实验 4. Crystallography & Experiment

晶胞参数 Unit Cell

对称性 Symmetry

精修参数 Refinement

5. 实体与聚合物信息 Entities & Polymers (3)

实体 1 Entity 1 polymer

聚合物 Polymer

来源 Source

实体 2 Entity 2 non-polymer

实体 3 Entity 3 water

6. 折叠分类 (SCOP + CATH) 60 domains

CATH v4.4 (60 domains)

7. 引用文献 (1)