Gephyrin
Rattus norvegicus
当前结构中的状态
| Assembly | 物理组成 | 蛋白状态 | 分子拷贝数 | 共同组分 | 数据核对 |
|---|---|---|---|---|---|
| 1 | 蛋白同源多聚体 | 同源多聚体 | 蛋白 2 | water × 2 | 与蛋白数一致 |
数据库中的同蛋白其他状态
查看构建体与数据证据
| UniProt名称 | GEPH_RAT |
| Isoform | — |
| PDB实体 | 1 |
| 链与序列区间 | 作者链 A； PDB构建体 1–419； UniProt 350–768 |
4pd0
1.7 A resolution structure of gephyrin's E-domain
1. 蛋白身份与相关结构 Protein Identity & Related Structures
页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中；数据库内部编号、导入时间和 assembly 操作表达式仅用于维护，因此不在读者页面展示。
2. 结构基本信息 2. Structure Basics
| 条目编号 entry_id | 4pd0 |
| 沉积日期 deposition_date | 2014-04-17 |
| 结构标题 title | 1.7 A resolution structure of gephyrin's E-domain |
| 关键词 keywords | ;Scaffolding protein, Neurotransmitter receptor anchoring protein, Molybdenum cofactor biosynthesis, Biosynthetic Protein, Structural Protein ;; Biosynthetic Protein,Structural Protein |
| 实验方法 method | X-RAY DIFFRACTION |
3. Official assembly/model 理论 SAXS Official SAXS Profiles
页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。
4pd0__assembly_1__model_1
Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
4pd0__assembly_1__model_1 | I(q)
4pd0__assembly_1__model_1 | P(r) · Pending
| Rg（Guinier） | 32.84 Å |
| Rg（电子密度） | 32.42 Å |
| 总 Rg | 32.73 Å |
| 原子数 | 12786 |
| 残基数 | 832 |
| 排除体积 | 113450 ų |
| 最大 q | 0.500 Å⁻¹ |
4. 晶体学与实验 4. Crystallography & Experiment
5. 实体与聚合物信息 Entities & Polymers (2)
6. 折叠分类 (SCOP + CATH) 7 domains
SCOP 2.08 (3 domains)
| 结构域编号 domain_id | d4pd0a1 |
| 类 Class class | b — All beta proteins |
| 折叠类型 Fold fold | b.103 — MoeA N-terminal region -like |
| 超家族 Superfamily superfamily | b.103.1 — MoeA N-terminal region -like |
| 家族 Family family | b.103.1.1 — MoeA N-terminal region -like |
| 结构域编号 domain_id | d4pd0a2 |
| 类 Class class | c — Alpha and beta proteins (a/b) |
| 折叠类型 Fold fold | c.57 — Molybdenum cofactor biosynthesis proteins |
| 超家族 Superfamily superfamily | c.57.1 — Molybdenum cofactor biosynthesis proteins |
| 家族 Family family | c.57.1.0 — automated matches |
| 结构域编号 domain_id | d4pd0a3 |
| 类 Class class | b — All beta proteins |
| 折叠类型 Fold fold | b.85 — beta-clip |
| 超家族 Superfamily superfamily | b.85.6 — MoeA C-terminal domain-like |
| 家族 Family family | b.85.6.0 — automated matches |
CATH v4.4 (4 domains)
| 结构域编号 domain_id | 4pd0A01 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 40 — 3-Layer(aba) Sandwich |
| 拓扑 Topology topology | 980 — Molybdenum Cofactor Biosythetic Enzyme; Chain A |
| 同源超家族 H-superfamily homologous superfamily | 10 — MoaB/Mog-like domain |
| 结构域编号 domain_id | 4pd0A02 |
| 类 Class class | 3 — Alpha Beta |
| 架构 Architecture architecture | 90 — Alpha-Beta Complex |
| 拓扑 Topology topology | 105 — Molybdopterin biosynthesis moea protein, domain 2 |
| 同源超家族 H-superfamily homologous superfamily | 10 — Molybdopterin biosynthesis moea protein, domain 2 |
| 结构域编号 domain_id | 4pd0A03 |
| 类 Class class | 2 — Mainly Beta |
| 架构 Architecture architecture | 170 — Beta Complex |
| 拓扑 Topology topology | 190 — Molybdopterin biosynthesis moeA protein; domain 3 |
| 同源超家族 H-superfamily homologous superfamily | 11 — Molybdopterin biosynthesis moea protein, domain 3. |
| 结构域编号 domain_id | 4pd0A04 |
| 类 Class class | 2 — Mainly Beta |
| 架构 Architecture architecture | 40 — Beta Barrel |
| 拓扑 Topology topology | 340 — Beta-clip |
| 同源超家族 H-superfamily homologous superfamily | 10 — MoeA, C-terminal, domain IV |