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5jzw

Cryo-EM structures of aerolysin post-prepore and quasipore

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Aerolysin

Aeromonas hydrophila

UniProt P09167

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein homooligomer Homooligomer Protein 14 No other associated polymer Consistent with protein count

Other States of the Same Protein in the Database

Monomer
3c0n 3c0n 3g4n 3g4n

4 assemblies

Homodimer
1pre 1z52 3c0m 3c0o 3g4o

5 assemblies

Homotetramer

None

Other homooligomers
5jzh 5jzh 5jzt 5jzw 9fm6 9fml 9fmx 9fnp 9fnq 9gxj 9ign

11 assemblies

Heteromeric or nucleic-acid complex

None

View Construct and Data Evidence
UniProt name AERA_AERHY
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A； PDBConstruct 1–424； UniProt 24–447 Author chain B； PDBConstruct 1–424； UniProt 24–447 Author chain C； PDBConstruct 1–424； UniProt 24–447 Author chain D； PDBConstruct 1–424； UniProt 24–447 Author chain E； PDBConstruct 1–424； UniProt 24–447 Author chain F； PDBConstruct 1–424； UniProt 24–447 Author chain G； PDBConstruct 1–424； UniProt 24–447 Author chain H； PDBConstruct 1–424； UniProt 24–447 Author chain I； PDBConstruct 1–424； UniProt 24–447 Author chain J； PDBConstruct 1–424； UniProt 24–447 Author chain K； PDBConstruct 1–424； UniProt 24–447 Author chain L； PDBConstruct 1–424； UniProt 24–447 Author chain M； PDBConstruct 1–424； UniProt 24–447 Author chain N； PDBConstruct 1–424； UniProt 24–447

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id5jzw
Deposition date deposition_date2016-05-17
Structure title titleCryo-EM structures of aerolysin post-prepore and quasipore
Keywords keywordspore forming toxin, concentric beta-barrel, aerolysin, toxin; TOXIN
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

5jzw__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

5jzw__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

5jzw__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）60.52 Å
Rg (electron density)59.60 Å
Total Rg59.98 Å
Atom count83419
Residues5474
Excluded volume751070 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 5jzw__assembly_1__model_1 tetradecameric （14） Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (1)

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7. Citations (1)