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5kem

EBOV sGP in complex with variable Fab domains of IgGs c13C6 and BDBV91

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Ebola secreted glycoprotein

Zaire ebolavirus

UniProt Q05320

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 10 BDBV91 variable Fab domain light chain × 2 BDBV91 variable Fab domain heavy chain × 2 c13C6 variable Fab domain heavy chain × 2 c13C6 variable Fab domain light chain × 2 Consistent with protein count

Other States of the Same Protein in the Database

Monomer
2rlj

1 assemblies

Homodimer

None

Homotetramer

None

Other homooligomers
2ebo

1 assemblies

Heteromeric or nucleic-acid complex
3csy 3csy 5fhc 5hj3 5hj3 5jq3 5jq7 5jqb 5kel 5kem 5ken 6eay

41 assemblies; showing the first 12

View Construct and Data Evidence
UniProt name VGP_EBOZM
Isoform —
PDB entities 5
Chains and sequence ranges Author chain A； PDBConstruct 1–232； UniProt 53–284 Author chain F； PDBConstruct 1–232； UniProt 53–284

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id5kem
Deposition date deposition_date2016-06-09
Structure title titleEBOV sGP in complex with variable Fab domains of IgGs c13C6 and BDBV91
Keywords keywordsEbola virus secreted glycoprotein, sGP, antibodies, VIRAL PROTEIN-IMMUNE SYSTEM complex; VIRAL PROTEIN/IMMUNE SYSTEM
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

5kem__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

5kem__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

5kem__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）47.07 Å
Rg (electron density)47.39 Å
Total Rg47.64 Å
Atom count10616
Residues1376
Excluded volume187700 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 5kem__assembly_1__model_1 decameric （10） Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (5)

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7. Citations (1)