5o6v

The cryo-EM structure of Tick-borne encephalitis virus complexed with Fab fragment of neutralizing antibody 19/1786

Method: ELECTRON MICROSCOPY
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1. 蛋白身份与相关结构 Protein Identity & Related Structures

Envelope protein

物种未注明

UniProt Q01299

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 600 Fab 19/1786 - Heavy chain × 120 Fab 19/1786 - Light chain × 120 2-acetamido-2-deoxy-beta-D-glucopyranose × 180 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 POLG_TBEVH
Isoform —
PDB实体 1, 2
链与序列区间 作者链 A; PDB构建体 1–496; UniProt 281–776 作者链 B; PDB构建体 1–496; UniProt 281–776 作者链 C; PDB构建体 1–496; UniProt 281–776 作者链 D; PDB构建体 1–75; UniProt 206–280 作者链 E; PDB构建体 1–75; UniProt 206–280 作者链 F; PDB构建体 1–75; UniProt 206–280

页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中;数据库内部编号、导入时间和 assembly 操作表达式仅用于维护,因此不在读者页面展示。

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2. 结构基本信息 2. Structure Basics

条目编号 entry_id5o6v
沉积日期 deposition_date2017-06-07
结构标题 titleThe cryo-EM structure of Tick-borne encephalitis virus complexed with Fab fragment of neutralizing antibody 19/1786
关键词 keywordstick-borne encephalitis virus, Fab 19/1786, cryo-EM, VIRUS; VIRUS
实验方法 methodELECTRON MICROSCOPY
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3. Official assembly/model 理论 SAXS Official SAXS Profiles

页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。

5o6v__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

下载该曲线 .dat

5o6v__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 1010 1011 1012 q (1/Angstrom) I(q)
100 个绘图点;横轴和纵轴均采用对数尺度。

5o6v__assembly_1__model_1 | P(r) · Pending

新版 assembly/model P(r) 尚未计算 此处仅保留位置,不展示旧数据 r (Angstrom) P(r)
P(r) 将按相同 assembly/model 分别计算和展示。
Rg(Guinier)0.00 Å
Rg(电子密度)224.80 Å
总 Rg224.70 Å
原子数1160760
残基数151740
排除体积20673000 ų
最大 q0.500 Å⁻¹
Assembly Model 结构单元 聚集说明 状态 CRYSOL 操作
1 1 5o6v__assembly_1__model_1 600-meric (600) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
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4. 晶体学与实验 4. Crystallography & Experiment

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5. 实体与聚合物信息 Entities & Polymers (5)

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6. 折叠分类 (SCOP + CATH) 24 domains

CATH v4.4 (24 domains)

结构域编号 domain_id5o6vA01
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology98 — Tick-borne Encephalitis virus Glycoprotein; domain 1
同源超家族 H-superfamily homologous superfamily10 — Tick-borne Encephalitis virus Glycoprotein, domain 1
结构域编号 domain_id5o6vA02
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology67 — Viral Envelope Glycoprotein; domain 2
同源超家族 H-superfamily homologous superfamily10 — Viral Envelope Glycoprotein, domain 2
结构域编号 domain_id5o6vA03
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology387 — Viral Envelope Glycoprotein; domain 3
同源超家族 H-superfamily homologous superfamily10 — Viral Envelope Glycoprotein, domain 3
结构域编号 domain_id5o6vA04
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily350 —
结构域编号 domain_id5o6vA05
类 Class class1 — Mainly Alpha
架构 Architecture architecture20 — Up-down Bundle
拓扑 Topology topology1280 — Monooxygenase
同源超家族 H-superfamily homologous superfamily260 —
结构域编号 domain_id5o6vB01
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology98 — Tick-borne Encephalitis virus Glycoprotein; domain 1
同源超家族 H-superfamily homologous superfamily10 — Tick-borne Encephalitis virus Glycoprotein, domain 1
结构域编号 domain_id5o6vB02
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology67 — Viral Envelope Glycoprotein; domain 2
同源超家族 H-superfamily homologous superfamily10 — Viral Envelope Glycoprotein, domain 2
结构域编号 domain_id5o6vB03
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology387 — Viral Envelope Glycoprotein; domain 3
同源超家族 H-superfamily homologous superfamily10 — Viral Envelope Glycoprotein, domain 3
结构域编号 domain_id5o6vB04
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily350 —
结构域编号 domain_id5o6vB05
类 Class class1 — Mainly Alpha
架构 Architecture architecture20 — Up-down Bundle
拓扑 Topology topology1280 — Monooxygenase
同源超家族 H-superfamily homologous superfamily260 —
结构域编号 domain_id5o6vC01
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology98 — Tick-borne Encephalitis virus Glycoprotein; domain 1
同源超家族 H-superfamily homologous superfamily10 — Tick-borne Encephalitis virus Glycoprotein, domain 1
结构域编号 domain_id5o6vC02
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology67 — Viral Envelope Glycoprotein; domain 2
同源超家族 H-superfamily homologous superfamily10 — Viral Envelope Glycoprotein, domain 2
结构域编号 domain_id5o6vC03
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology387 — Viral Envelope Glycoprotein; domain 3
同源超家族 H-superfamily homologous superfamily10 — Viral Envelope Glycoprotein, domain 3
结构域编号 domain_id5o6vC04
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily350 —
结构域编号 domain_id5o6vC05
类 Class class1 — Mainly Alpha
架构 Architecture architecture20 — Up-down Bundle
拓扑 Topology topology1280 — Monooxygenase
同源超家族 H-superfamily homologous superfamily260 —
结构域编号 domain_id5o6vD00
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology8 — Helicase, Ruva Protein; domain 3
同源超家族 H-superfamily homologous superfamily970 — Flavivirus envelope glycoprotein M-like
结构域编号 domain_id5o6vE00
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology8 — Helicase, Ruva Protein; domain 3
同源超家族 H-superfamily homologous superfamily970 — Flavivirus envelope glycoprotein M-like
结构域编号 domain_id5o6vF00
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology8 — Helicase, Ruva Protein; domain 3
同源超家族 H-superfamily homologous superfamily970 — Flavivirus envelope glycoprotein M-like
结构域编号 domain_id5o6vH02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5o6vI02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5o6vL01
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5o6vL02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5o6vM01
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5o6vM02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
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7. 引用文献 (1)