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6qug

GHK tagged MBP-Nup98(1-29)

Method: X-RAY DIFFRACTION
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Maltodextrin-binding protein,Nucleoporin, putative

Tetrahymena thermophila (strain SB210)

UniProt A0A376KDN7

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Monomer Protein 1 其他Polymer 1 alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose × 1 COPPER (II) ION × 1 water × 1 Consistent with protein count
10 Insufficient information Monomer Protein 1 其他Polymer 1 alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose × 1 COPPER (II) ION × 1 PHOSPHATE ION × 1 water × 1 Consistent with protein count
11 Insufficient information Monomer Protein 1 其他Polymer 1 alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose × 1 COPPER (II) ION × 1 SULFATE ION × 1 water × 1 Consistent with protein count
12 Insufficient information Monomer Protein 1 其他Polymer 1 alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose × 1 COPPER (II) ION × 1 SULFATE ION × 1 water × 1 Consistent with protein count
2 Insufficient information Monomer Protein 1 其他Polymer 1 alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose × 1 COPPER (II) ION × 1 water × 1 Consistent with protein count
3 Insufficient information Monomer Protein 1 其他Polymer 1 alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose × 1 COPPER (II) ION × 1 SULFATE ION × 1 water × 1 Consistent with protein count
4 Insufficient information Monomer Protein 1 其他Polymer 1 alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose × 1 COPPER (II) ION × 1 PHOSPHATE ION × 2 water × 1 Consistent with protein count
5 Insufficient information Monomer Protein 1 其他Polymer 1 alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose × 1 COPPER (II) ION × 1 water × 1 Consistent with protein count
6 Insufficient information Monomer Protein 1 其他Polymer 1 alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose × 1 COPPER (II) ION × 1 water × 1 Consistent with protein count
7 Insufficient information Monomer Protein 1 其他Polymer 1 alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose × 1 COPPER (II) ION × 1 water × 1 Consistent with protein count
8 Insufficient information Monomer Protein 1 其他Polymer 1 alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose × 1 COPPER (II) ION × 1 water × 1 Consistent with protein count
9 Insufficient information Monomer Protein 1 其他Polymer 1 alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose × 1 COPPER (II) ION × 1 PHOSPHATE ION × 1 water × 1 Consistent with protein count

Other States of the Same Protein in the Database

Monomer

None

Homodimer

None

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
6i4y 6qf7 6qf7 6qug 6qug 6qug 6qug 6qug 6qug 6qug 6qug 6qug

33 assemblies; showing the first 12

View Construct and Data Evidence
UniProt name A0A376KDN7_ECOLX
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A； PDBConstruct 4–369； UniProt 27–392 Author chain B； PDBConstruct 4–369； UniProt 27–392 Author chain C； PDBConstruct 4–369； UniProt 27–392 Author chain D； PDBConstruct 4–369； UniProt 27–392 Author chain E； PDBConstruct 4–369； UniProt 27–392 Author chain F； PDBConstruct 4–369； UniProt 27–392 Author chain G； PDBConstruct 4–369； UniProt 27–392 Author chain H； PDBConstruct 4–369； UniProt 27–392 Author chain I； PDBConstruct 4–369； UniProt 27–392 Author chain J； PDBConstruct 4–369； UniProt 27–392 Author chain K； PDBConstruct 4–369； UniProt 27–392 Author chain L； PDBConstruct 4–369； UniProt 27–392

Maltodextrin-binding protein,Nucleoporin, putative

Tetrahymena thermophila (strain SB210)

UniProt I7MHJ5

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Monomer Protein 1 其他Polymer 1 alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose × 1 COPPER (II) ION × 1 water × 1 Consistent with protein count
10 Insufficient information Monomer Protein 1 其他Polymer 1 alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose × 1 COPPER (II) ION × 1 PHOSPHATE ION × 1 water × 1 Consistent with protein count
11 Insufficient information Monomer Protein 1 其他Polymer 1 alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose × 1 COPPER (II) ION × 1 SULFATE ION × 1 water × 1 Consistent with protein count
12 Insufficient information Monomer Protein 1 其他Polymer 1 alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose × 1 COPPER (II) ION × 1 SULFATE ION × 1 water × 1 Consistent with protein count
2 Insufficient information Monomer Protein 1 其他Polymer 1 alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose × 1 COPPER (II) ION × 1 water × 1 Consistent with protein count
3 Insufficient information Monomer Protein 1 其他Polymer 1 alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose × 1 COPPER (II) ION × 1 SULFATE ION × 1 water × 1 Consistent with protein count
4 Insufficient information Monomer Protein 1 其他Polymer 1 alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose × 1 COPPER (II) ION × 1 PHOSPHATE ION × 2 water × 1 Consistent with protein count
5 Insufficient information Monomer Protein 1 其他Polymer 1 alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose × 1 COPPER (II) ION × 1 water × 1 Consistent with protein count
6 Insufficient information Monomer Protein 1 其他Polymer 1 alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose × 1 COPPER (II) ION × 1 water × 1 Consistent with protein count
7 Insufficient information Monomer Protein 1 其他Polymer 1 alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose × 1 COPPER (II) ION × 1 water × 1 Consistent with protein count
8 Insufficient information Monomer Protein 1 其他Polymer 1 alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose × 1 COPPER (II) ION × 1 water × 1 Consistent with protein count
9 Insufficient information Monomer Protein 1 其他Polymer 1 alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose × 1 COPPER (II) ION × 1 PHOSPHATE ION × 1 water × 1 Consistent with protein count

Other States of the Same Protein in the Database

Monomer

None

Homodimer

None

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
6qug 6qug 6qug 6qug 6qug 6qug 6qug 6qug 6qug 6qug 6qug 6qug

12 assemblies

View Construct and Data Evidence
UniProt name I7MHJ5_TETTS
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A； PDBConstruct 374–402； UniProt 1–29 Author chain B； PDBConstruct 374–402； UniProt 1–29 Author chain C； PDBConstruct 374–402； UniProt 1–29 Author chain D； PDBConstruct 374–402； UniProt 1–29 Author chain E； PDBConstruct 374–402； UniProt 1–29 Author chain F； PDBConstruct 374–402； UniProt 1–29 Author chain G； PDBConstruct 374–402； UniProt 1–29 Author chain H； PDBConstruct 374–402； UniProt 1–29 Author chain I； PDBConstruct 374–402； UniProt 1–29 Author chain J； PDBConstruct 374–402； UniProt 1–29 Author chain K； PDBConstruct 374–402； UniProt 1–29 Author chain L； PDBConstruct 374–402； UniProt 1–29

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id6qug
Deposition date deposition_date2019-02-27
Structure title titleGHK tagged MBP-Nup98(1-29)
Keywords keywordsMBP fusion Nup98, transport protein; TRANSPORT PROTEIN
Experimental Method methodX-RAY DIFFRACTION
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

6qug__assembly_10__model_1

Assembly 10 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

6qug__assembly_10__model_1 | I(q)

10-2 10-1 105 106 107 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

6qug__assembly_10__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）21.78 Å
Rg (electron density)20.68 Å
Total Rg21.73 Å
Atom count2888
Residues373
Excluded volume51647 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 6qug__assembly_1__model_1 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
2 1 6qug__assembly_2__model_1 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
3 1 6qug__assembly_3__model_1 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
4 1 6qug__assembly_4__model_1 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
5 1 6qug__assembly_5__model_1 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
6 1 6qug__assembly_6__model_1 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
7 1 6qug__assembly_7__model_1 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
8 1 6qug__assembly_8__model_1 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
9 1 6qug__assembly_9__model_1 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
10 1 6qug__assembly_10__model_1 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
11 1 6qug__assembly_11__model_1 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
12 1 6qug__assembly_12__model_1 monomeric （1） Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (6)

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6. Fold Classification (SCOP + CATH) 24 domains

SCOP 2.08 (24 domains)

Domain ID domain_idd6quga1
Class classc — Alpha and beta proteins (a/b)
Fold Fold foldc.94 — Periplasmic binding protein-like II
Superfamily Superfamily superfamilyc.94.1 — Periplasmic binding protein-like II
Family Family familyc.94.1.1 — Phosphate binding protein-like
Domain ID domain_idd6quga2
Class classl — Artifacts
Fold Fold foldl.1 — Tags
Superfamily Superfamily superfamilyl.1.1 — Tags
Family Family familyl.1.1.1 — Tags
Domain ID domain_idd6qugb1
Class classc — Alpha and beta proteins (a/b)
Fold Fold foldc.94 — Periplasmic binding protein-like II
Superfamily Superfamily superfamilyc.94.1 — Periplasmic binding protein-like II
Family Family familyc.94.1.1 — Phosphate binding protein-like
Domain ID domain_idd6qugb2
Class classl — Artifacts
Fold Fold foldl.1 — Tags
Superfamily Superfamily superfamilyl.1.1 — Tags
Family Family familyl.1.1.1 — Tags
Domain ID domain_idd6qugc1
Class classc — Alpha and beta proteins (a/b)
Fold Fold foldc.94 — Periplasmic binding protein-like II
Superfamily Superfamily superfamilyc.94.1 — Periplasmic binding protein-like II
Family Family familyc.94.1.1 — Phosphate binding protein-like
Domain ID domain_idd6qugc2
Class classl — Artifacts
Fold Fold foldl.1 — Tags
Superfamily Superfamily superfamilyl.1.1 — Tags
Family Family familyl.1.1.1 — Tags
Domain ID domain_idd6qugd1
Class classc — Alpha and beta proteins (a/b)
Fold Fold foldc.94 — Periplasmic binding protein-like II
Superfamily Superfamily superfamilyc.94.1 — Periplasmic binding protein-like II
Family Family familyc.94.1.1 — Phosphate binding protein-like
Domain ID domain_idd6qugd2
Class classl — Artifacts
Fold Fold foldl.1 — Tags
Superfamily Superfamily superfamilyl.1.1 — Tags
Family Family familyl.1.1.1 — Tags
Domain ID domain_idd6quge1
Class classc — Alpha and beta proteins (a/b)
Fold Fold foldc.94 — Periplasmic binding protein-like II
Superfamily Superfamily superfamilyc.94.1 — Periplasmic binding protein-like II
Family Family familyc.94.1.1 — Phosphate binding protein-like
Domain ID domain_idd6quge2
Class classl — Artifacts
Fold Fold foldl.1 — Tags
Superfamily Superfamily superfamilyl.1.1 — Tags
Family Family familyl.1.1.1 — Tags
Domain ID domain_idd6qugf1
Class classc — Alpha and beta proteins (a/b)
Fold Fold foldc.94 — Periplasmic binding protein-like II
Superfamily Superfamily superfamilyc.94.1 — Periplasmic binding protein-like II
Family Family familyc.94.1.1 — Phosphate binding protein-like
Domain ID domain_idd6qugf2
Class classl — Artifacts
Fold Fold foldl.1 — Tags
Superfamily Superfamily superfamilyl.1.1 — Tags
Family Family familyl.1.1.1 — Tags
Domain ID domain_idd6qugg1
Class classc — Alpha and beta proteins (a/b)
Fold Fold foldc.94 — Periplasmic binding protein-like II
Superfamily Superfamily superfamilyc.94.1 — Periplasmic binding protein-like II
Family Family familyc.94.1.1 — Phosphate binding protein-like
Domain ID domain_idd6qugg2
Class classl — Artifacts
Fold Fold foldl.1 — Tags
Superfamily Superfamily superfamilyl.1.1 — Tags
Family Family familyl.1.1.1 — Tags
Domain ID domain_idd6qugh1
Class classc — Alpha and beta proteins (a/b)
Fold Fold foldc.94 — Periplasmic binding protein-like II
Superfamily Superfamily superfamilyc.94.1 — Periplasmic binding protein-like II
Family Family familyc.94.1.1 — Phosphate binding protein-like
Domain ID domain_idd6qugh2
Class classl — Artifacts
Fold Fold foldl.1 — Tags
Superfamily Superfamily superfamilyl.1.1 — Tags
Family Family familyl.1.1.1 — Tags
Domain ID domain_idd6qugi1
Class classc — Alpha and beta proteins (a/b)
Fold Fold foldc.94 — Periplasmic binding protein-like II
Superfamily Superfamily superfamilyc.94.1 — Periplasmic binding protein-like II
Family Family familyc.94.1.1 — Phosphate binding protein-like
Domain ID domain_idd6qugi2
Class classl — Artifacts
Fold Fold foldl.1 — Tags
Superfamily Superfamily superfamilyl.1.1 — Tags
Family Family familyl.1.1.1 — Tags
Domain ID domain_idd6qugj1
Class classc — Alpha and beta proteins (a/b)
Fold Fold foldc.94 — Periplasmic binding protein-like II
Superfamily Superfamily superfamilyc.94.1 — Periplasmic binding protein-like II
Family Family familyc.94.1.1 — Phosphate binding protein-like
Domain ID domain_idd6qugj2
Class classl — Artifacts
Fold Fold foldl.1 — Tags
Superfamily Superfamily superfamilyl.1.1 — Tags
Family Family familyl.1.1.1 — Tags
Domain ID domain_idd6qugk1
Class classc — Alpha and beta proteins (a/b)
Fold Fold foldc.94 — Periplasmic binding protein-like II
Superfamily Superfamily superfamilyc.94.1 — Periplasmic binding protein-like II
Family Family familyc.94.1.1 — Phosphate binding protein-like
Domain ID domain_idd6qugk2
Class classl — Artifacts
Fold Fold foldl.1 — Tags
Superfamily Superfamily superfamilyl.1.1 — Tags
Family Family familyl.1.1.1 — Tags
Domain ID domain_idd6qugl1
Class classc — Alpha and beta proteins (a/b)
Fold Fold foldc.94 — Periplasmic binding protein-like II
Superfamily Superfamily superfamilyc.94.1 — Periplasmic binding protein-like II
Family Family familyc.94.1.1 — Phosphate binding protein-like
Domain ID domain_idd6qugl2
Class classl — Artifacts
Fold Fold foldl.1 — Tags
Superfamily Superfamily superfamilyl.1.1 — Tags
Family Family familyl.1.1.1 — Tags
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7. Citations (1)