← Back to search
6sdn

Trypanosoma cruzi farnesyl diphosphate synthase in complex with fragment j82

Method: X-RAY DIFFRACTION
▼

1. Protein Identity and Related Structures Protein Identity & Related Structures

Farnesyl diphosphate synthase

Trypanosoma cruzi

UniProt Q8WS26

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein homooligomer Homooligomer Protein 2 ZINC ION × 4 4-NITROCATECHOL × 2 SULFATE ION × 2 water × 2 Consistent with protein count

Other States of the Same Protein in the Database

Monomer

None

Homodimer
1yhk 1yhl 1yhm 1yhm 5qpd 5qpe 5qpf 5qpg 5qph 5qpi 5qpj 5qpk

59 assemblies; showing the first 12

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex

None

View Construct and Data Evidence
UniProt name Q8WS26_TRYCR
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A； PDBConstruct 1–362； UniProt 64–425

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

▼

2. Structure Basics 2. Structure Basics

Entry ID entry_id6sdn
Deposition date deposition_date2019-07-29
Structure title titleTrypanosoma cruzi farnesyl diphosphate synthase in complex with fragment j82
Keywords keywordsFarnesyl diphosphate synthase (FDPS), Farnesyl pyrophosphate synthase (FPPS), Trypanosoma cruzi, complex with fragment, TRANSFERASE; TRANSFERASE
Experimental Method methodX-RAY DIFFRACTION
▼

3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

6sdn__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

6sdn__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

6sdn__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）27.57 Å
Rg (electron density)26.70 Å
Total Rg27.40 Å
Atom count11072
Residues720
Excluded volume101370 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 6sdn__assembly_1__model_1 dimeric （2） Success 4.1.3-1-20251215 (887e7ef) View Download
▶

4. Crystallography and Experiment 4. Crystallography & Experiment

▶

5. Entities and Polymers Entities & Polymers (5)

▼

6. Fold Classification (SCOP + CATH) 1 domains

SCOP 2.08 (1 domains)

Domain ID domain_idd6sdna_
Class classa — All alpha proteins
Fold Fold folda.128 — Terpenoid synthases
Superfamily Superfamily superfamilya.128.1 — Terpenoid synthases
Family Family familya.128.1.0 — automated matches
▶

7. Citations (1)