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6v3n

Crystal structure of CDYL2 in complex with H3K27me3

Method: X-RAY DIFFRACTION
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Chromodomain Y-like protein 2

Homo sapiens

UniProt Q8N8U2

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 2 ACE-GLN-LEU-ALA-THR-LYS-ALA-ALA-ARG-M3L-SER-ALA-PRO-ALA-THR-TYR-NH2 × 1 UNKNOWN LIGAND × 10 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 2 ACE-GLN-LEU-ALA-THR-LYS-ALA-ALA-ARG-M3L-SER-ALA-PRO-ALA-THR-TYR-NH2 × 1 UNKNOWN LIGAND × 2 Consistent with protein count

Other States of the Same Protein in the Database

Monomer
2mj8

1 assemblies

Homodimer
4hae

1 assemblies

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
5jjz 5jjz 6v2d 6v2d 6v2d 6v2d 6v2d 6v2d 6v2h 6v2h 6v2h 6v2h

48 assemblies; showing the first 12

View Construct and Data Evidence
UniProt name CDYL2_HUMAN
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A； PDBConstruct 2–64； UniProt 2–64 Author chain B； PDBConstruct 2–64； UniProt 2–64

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id6v3n
Deposition date deposition_date2019-11-26
Structure title titleCrystal structure of CDYL2 in complex with H3K27me3
Keywords keywordschromodomain, epigenetics, Structural Genomics, Structural Genomics Consortium, SGC, PROTEIN BINDING, GENE REGULATION; GENE REGULATION
Experimental Method methodX-RAY DIFFRACTION
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 6v3n__assembly_1__model_1 dimeric （2） Excluded — —
Exclusion reason： The source record does not identify the atom or ion element unambiguously, so a reliable calculation is not possible.
2 1 6v3n__assembly_2__model_1 dimeric （2） Excluded — —
Exclusion reason： The source record does not identify the atom or ion element unambiguously, so a reliable calculation is not possible.
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (3)

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7. Citations (1)