7e8t

Monomer of Ypt32-TRAPPII

Method: ELECTRON MICROSCOPY

1. 蛋白身份与相关结构 Protein Identity & Related Structures

GTP-binding protein YPT32/YPT11

Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

UniProt P51996

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 12 Trafficking protein particle complex II-specific subunit 130 × 1 (Q03660) Trafficking protein particle complex II-specific subunit 120 × 1 (Q04183) Trafficking protein particle complex II-specific subunit 65 × 1 (P32893) Trafficking protein particle complex subunit 33 × 1 (Q99394) Trafficking protein particle complex subunit 31 × 1 (Q03337) Trafficking protein particle complex subunit 23 × 1 (Q03784) Trafficking protein particle complex subunit 20 × 1 (P38334) TRAPP-associated protein TCA17 × 1 (P32613) Trafficking protein particle complex subunit BET5 × 1 (Q03630) Trafficking protein particle complex subunit BET3 × 2 (P36149) 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 YPT32_YEAST
Isoform
PDB实体 1
链与序列区间 作者链 L; PDB构建体 1–222; UniProt 1–222

Trafficking protein particle complex II-specific subunit 130

Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

UniProt Q03660

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 12 GTP-binding protein YPT32/YPT11 × 1 (P51996) Trafficking protein particle complex II-specific subunit 120 × 1 (Q04183) Trafficking protein particle complex II-specific subunit 65 × 1 (P32893) Trafficking protein particle complex subunit 33 × 1 (Q99394) Trafficking protein particle complex subunit 31 × 1 (Q03337) Trafficking protein particle complex subunit 23 × 1 (Q03784) Trafficking protein particle complex subunit 20 × 1 (P38334) TRAPP-associated protein TCA17 × 1 (P32613) Trafficking protein particle complex subunit BET5 × 1 (Q03630) Trafficking protein particle complex subunit BET3 × 2 (P36149) 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 TR130_YEAST
Isoform
PDB实体 2
链与序列区间 作者链 I; PDB构建体 1–1102; UniProt 1–1102

Trafficking protein particle complex II-specific subunit 120

Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

UniProt Q04183

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 12 GTP-binding protein YPT32/YPT11 × 1 (P51996) Trafficking protein particle complex II-specific subunit 130 × 1 (Q03660) Trafficking protein particle complex II-specific subunit 65 × 1 (P32893) Trafficking protein particle complex subunit 33 × 1 (Q99394) Trafficking protein particle complex subunit 31 × 1 (Q03337) Trafficking protein particle complex subunit 23 × 1 (Q03784) Trafficking protein particle complex subunit 20 × 1 (P38334) TRAPP-associated protein TCA17 × 1 (P32613) Trafficking protein particle complex subunit BET5 × 1 (Q03630) Trafficking protein particle complex subunit BET3 × 2 (P36149) 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 TR120_YEAST
Isoform
PDB实体 3
链与序列区间 作者链 J; PDB构建体 1–1289; UniProt 1–1289

Trafficking protein particle complex II-specific subunit 65

Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

UniProt P32893

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 12 GTP-binding protein YPT32/YPT11 × 1 (P51996) Trafficking protein particle complex II-specific subunit 130 × 1 (Q03660) Trafficking protein particle complex II-specific subunit 120 × 1 (Q04183) Trafficking protein particle complex subunit 33 × 1 (Q99394) Trafficking protein particle complex subunit 31 × 1 (Q03337) Trafficking protein particle complex subunit 23 × 1 (Q03784) Trafficking protein particle complex subunit 20 × 1 (P38334) TRAPP-associated protein TCA17 × 1 (P32613) Trafficking protein particle complex subunit BET5 × 1 (Q03630) Trafficking protein particle complex subunit BET3 × 2 (P36149) 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 TRS65_YEAST
Isoform
PDB实体 4
链与序列区间 作者链 K; PDB构建体 1–560; UniProt 1–560

Trafficking protein particle complex subunit 33

Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

UniProt Q99394

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 12 GTP-binding protein YPT32/YPT11 × 1 (P51996) Trafficking protein particle complex II-specific subunit 130 × 1 (Q03660) Trafficking protein particle complex II-specific subunit 120 × 1 (Q04183) Trafficking protein particle complex II-specific subunit 65 × 1 (P32893) Trafficking protein particle complex subunit 31 × 1 (Q03337) Trafficking protein particle complex subunit 23 × 1 (Q03784) Trafficking protein particle complex subunit 20 × 1 (P38334) TRAPP-associated protein TCA17 × 1 (P32613) Trafficking protein particle complex subunit BET5 × 1 (Q03630) Trafficking protein particle complex subunit BET3 × 2 (P36149) 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 TRS33_YEAST
Isoform
PDB实体 5
链与序列区间 作者链 B; PDB构建体 1–268; UniProt 1–268

Trafficking protein particle complex subunit 31

Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

UniProt Q03337

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 12 GTP-binding protein YPT32/YPT11 × 1 (P51996) Trafficking protein particle complex II-specific subunit 130 × 1 (Q03660) Trafficking protein particle complex II-specific subunit 120 × 1 (Q04183) Trafficking protein particle complex II-specific subunit 65 × 1 (P32893) Trafficking protein particle complex subunit 33 × 1 (Q99394) Trafficking protein particle complex subunit 23 × 1 (Q03784) Trafficking protein particle complex subunit 20 × 1 (P38334) TRAPP-associated protein TCA17 × 1 (P32613) Trafficking protein particle complex subunit BET5 × 1 (Q03630) Trafficking protein particle complex subunit BET3 × 2 (P36149) 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 TRS31_YEAST
Isoform
PDB实体 6
链与序列区间 作者链 G; PDB构建体 1–283; UniProt 1–283

Trafficking protein particle complex subunit 23

Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

UniProt Q03784

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 12 GTP-binding protein YPT32/YPT11 × 1 (P51996) Trafficking protein particle complex II-specific subunit 130 × 1 (Q03660) Trafficking protein particle complex II-specific subunit 120 × 1 (Q04183) Trafficking protein particle complex II-specific subunit 65 × 1 (P32893) Trafficking protein particle complex subunit 33 × 1 (Q99394) Trafficking protein particle complex subunit 31 × 1 (Q03337) Trafficking protein particle complex subunit 20 × 1 (P38334) TRAPP-associated protein TCA17 × 1 (P32613) Trafficking protein particle complex subunit BET5 × 1 (Q03630) Trafficking protein particle complex subunit BET3 × 2 (P36149) 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 TRS23_YEAST
Isoform
PDB实体 7
链与序列区间 作者链 E; PDB构建体 1–219; UniProt 1–219

Trafficking protein particle complex subunit 20

Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

UniProt P38334

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 12 GTP-binding protein YPT32/YPT11 × 1 (P51996) Trafficking protein particle complex II-specific subunit 130 × 1 (Q03660) Trafficking protein particle complex II-specific subunit 120 × 1 (Q04183) Trafficking protein particle complex II-specific subunit 65 × 1 (P32893) Trafficking protein particle complex subunit 33 × 1 (Q99394) Trafficking protein particle complex subunit 31 × 1 (Q03337) Trafficking protein particle complex subunit 23 × 1 (Q03784) TRAPP-associated protein TCA17 × 1 (P32613) Trafficking protein particle complex subunit BET5 × 1 (Q03630) Trafficking protein particle complex subunit BET3 × 2 (P36149) 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 TRS20_YEAST
Isoform
PDB实体 8
链与序列区间 作者链 H; PDB构建体 1–175; UniProt 1–175

TRAPP-associated protein TCA17

Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

UniProt P32613

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 12 GTP-binding protein YPT32/YPT11 × 1 (P51996) Trafficking protein particle complex II-specific subunit 130 × 1 (Q03660) Trafficking protein particle complex II-specific subunit 120 × 1 (Q04183) Trafficking protein particle complex II-specific subunit 65 × 1 (P32893) Trafficking protein particle complex subunit 33 × 1 (Q99394) Trafficking protein particle complex subunit 31 × 1 (Q03337) Trafficking protein particle complex subunit 23 × 1 (Q03784) Trafficking protein particle complex subunit 20 × 1 (P38334) Trafficking protein particle complex subunit BET5 × 1 (Q03630) Trafficking protein particle complex subunit BET3 × 2 (P36149) 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 TCA17_YEAST
Isoform
PDB实体 9
链与序列区间 作者链 A; PDB构建体 1–152; UniProt 1–152

Trafficking protein particle complex subunit BET5

Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

UniProt Q03630

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 12 GTP-binding protein YPT32/YPT11 × 1 (P51996) Trafficking protein particle complex II-specific subunit 130 × 1 (Q03660) Trafficking protein particle complex II-specific subunit 120 × 1 (Q04183) Trafficking protein particle complex II-specific subunit 65 × 1 (P32893) Trafficking protein particle complex subunit 33 × 1 (Q99394) Trafficking protein particle complex subunit 31 × 1 (Q03337) Trafficking protein particle complex subunit 23 × 1 (Q03784) Trafficking protein particle complex subunit 20 × 1 (P38334) TRAPP-associated protein TCA17 × 1 (P32613) Trafficking protein particle complex subunit BET3 × 2 (P36149) 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 BET5_YEAST
Isoform
PDB实体 10
链与序列区间 作者链 D; PDB构建体 1–159; UniProt 1–159

Trafficking protein particle complex subunit BET3

Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

UniProt P36149

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 12 GTP-binding protein YPT32/YPT11 × 1 (P51996) Trafficking protein particle complex II-specific subunit 130 × 1 (Q03660) Trafficking protein particle complex II-specific subunit 120 × 1 (Q04183) Trafficking protein particle complex II-specific subunit 65 × 1 (P32893) Trafficking protein particle complex subunit 33 × 1 (Q99394) Trafficking protein particle complex subunit 31 × 1 (Q03337) Trafficking protein particle complex subunit 23 × 1 (Q03784) Trafficking protein particle complex subunit 20 × 1 (P38334) TRAPP-associated protein TCA17 × 1 (P32613) Trafficking protein particle complex subunit BET5 × 1 (Q03630) 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 BET3_YEAST
Isoform
PDB实体 11
链与序列区间 作者链 C; PDB构建体 1–193; UniProt 1–193 作者链 F; PDB构建体 1–193; UniProt 1–193

页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中;数据库内部编号、导入时间和 assembly 操作表达式仅用于维护,因此不在读者页面展示。

2. 结构基本信息 2. Structure Basics

条目编号 entry_id7e8t
沉积日期 deposition_date2021-03-02
结构标题 titleMonomer of Ypt32-TRAPPII
关键词 keywordsComplex, TRANSPORT PROTEIN; TRANSPORT PROTEIN
实验方法 methodELECTRON MICROSCOPY

3. Official assembly/model 理论 SAXS Official SAXS Profiles

页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。

7e8t__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

下载该曲线 .dat

7e8t__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 个绘图点;横轴和纵轴均采用对数尺度。

7e8t__assembly_1__model_1 | P(r) · Pending

新版 assembly/model P(r) 尚未计算 此处仅保留位置,不展示旧数据 r (Angstrom) P(r)
P(r) 将按相同 assembly/model 分别计算和展示。
Rg(Guinier)72.81 Å
Rg(电子密度)72.12 Å
总 Rg71.30 Å
原子数24894
残基数3492
排除体积437240 ų
最大 q0.500 Å⁻¹
Assembly Model 结构单元 聚集说明 状态 CRYSOL 操作
1 1 7e8t__assembly_1__model_1 dodecameric (12) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载

4. 晶体学与实验 4. Crystallography & Experiment

5. 实体与聚合物信息 Entities & Polymers (11)

6. 折叠分类 (SCOP + CATH) 2 domains

CATH v4.4 (2 domains)

结构域编号 domain_id7e8tA01
类 Class class3 — Alpha Beta
架构 Architecture architecture30 — 2-Layer Sandwich
拓扑 Topology topology450 — Beta-Lactamase
同源超家族 H-superfamily homologous superfamily70
结构域编号 domain_id7e8tL01
类 Class class3 — Alpha Beta
架构 Architecture architecture40 — 3-Layer(aba) Sandwich
拓扑 Topology topology50 — Rossmann fold
同源超家族 H-superfamily homologous superfamily300 — P-loop containing nucleotide triphosphate hydrolases

7. 引用文献 (1)