7ea3

Intact Ypt32-TRAPPII (dimer).

Method: ELECTRON MICROSCOPY

1. Protein Identity and Related Structures Protein Identity & Related Structures

TRAPP-associated protein TCA17

Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

UniProt P32613

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 24 Trafficking protein particle complex subunit 33 × 2 (Q99394) Trafficking protein particle complex subunit BET3 × 4 (P36149) Trafficking protein particle complex subunit BET5 × 2 (Q03630) Trafficking protein particle complex subunit 23 × 2 (Q03784) Trafficking protein particle complex subunit 31 × 2 (Q03337) Trafficking protein particle complex subunit 20 × 2 (P38334) Trafficking protein particle complex II-specific subunit 130 × 2 (Q03660) Trafficking protein particle complex II-specific subunit 120 × 2 (Q04183) Trafficking protein particle complex II-specific subunit 65 × 2 (P32893) GTP-binding protein YPT32/YPT11 × 2 (P51996) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TCA17_YEAST
Isoform
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–152; UniProt 1–152 Author chain N; PDBConstruct 1–152; UniProt 1–152

Trafficking protein particle complex subunit 33

Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

UniProt Q99394

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 24 TRAPP-associated protein TCA17 × 2 (P32613) Trafficking protein particle complex subunit BET3 × 4 (P36149) Trafficking protein particle complex subunit BET5 × 2 (Q03630) Trafficking protein particle complex subunit 23 × 2 (Q03784) Trafficking protein particle complex subunit 31 × 2 (Q03337) Trafficking protein particle complex subunit 20 × 2 (P38334) Trafficking protein particle complex II-specific subunit 130 × 2 (Q03660) Trafficking protein particle complex II-specific subunit 120 × 2 (Q04183) Trafficking protein particle complex II-specific subunit 65 × 2 (P32893) GTP-binding protein YPT32/YPT11 × 2 (P51996) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TRS33_YEAST
Isoform
PDB entities 2
Chains and sequence ranges Author chain B; PDBConstruct 1–268; UniProt 1–268 Author chain O; PDBConstruct 1–268; UniProt 1–268

Trafficking protein particle complex subunit BET3

Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

UniProt P36149

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 24 TRAPP-associated protein TCA17 × 2 (P32613) Trafficking protein particle complex subunit 33 × 2 (Q99394) Trafficking protein particle complex subunit BET5 × 2 (Q03630) Trafficking protein particle complex subunit 23 × 2 (Q03784) Trafficking protein particle complex subunit 31 × 2 (Q03337) Trafficking protein particle complex subunit 20 × 2 (P38334) Trafficking protein particle complex II-specific subunit 130 × 2 (Q03660) Trafficking protein particle complex II-specific subunit 120 × 2 (Q04183) Trafficking protein particle complex II-specific subunit 65 × 2 (P32893) GTP-binding protein YPT32/YPT11 × 2 (P51996) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name BET3_YEAST
Isoform
PDB entities 3
Chains and sequence ranges Author chain C; PDBConstruct 1–193; UniProt 1–193 Author chain F; PDBConstruct 1–193; UniProt 1–193 Author chain P; PDBConstruct 1–193; UniProt 1–193 Author chain S; PDBConstruct 1–193; UniProt 1–193

Trafficking protein particle complex subunit BET5

Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

UniProt Q03630

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 24 TRAPP-associated protein TCA17 × 2 (P32613) Trafficking protein particle complex subunit 33 × 2 (Q99394) Trafficking protein particle complex subunit BET3 × 4 (P36149) Trafficking protein particle complex subunit 23 × 2 (Q03784) Trafficking protein particle complex subunit 31 × 2 (Q03337) Trafficking protein particle complex subunit 20 × 2 (P38334) Trafficking protein particle complex II-specific subunit 130 × 2 (Q03660) Trafficking protein particle complex II-specific subunit 120 × 2 (Q04183) Trafficking protein particle complex II-specific subunit 65 × 2 (P32893) GTP-binding protein YPT32/YPT11 × 2 (P51996) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name BET5_YEAST
Isoform
PDB entities 4
Chains and sequence ranges Author chain D; PDBConstruct 1–154; UniProt 1–159 Author chain Q; PDBConstruct 1–154; UniProt 1–159

Trafficking protein particle complex subunit 23

Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

UniProt Q03784

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 24 TRAPP-associated protein TCA17 × 2 (P32613) Trafficking protein particle complex subunit 33 × 2 (Q99394) Trafficking protein particle complex subunit BET3 × 4 (P36149) Trafficking protein particle complex subunit BET5 × 2 (Q03630) Trafficking protein particle complex subunit 31 × 2 (Q03337) Trafficking protein particle complex subunit 20 × 2 (P38334) Trafficking protein particle complex II-specific subunit 130 × 2 (Q03660) Trafficking protein particle complex II-specific subunit 120 × 2 (Q04183) Trafficking protein particle complex II-specific subunit 65 × 2 (P32893) GTP-binding protein YPT32/YPT11 × 2 (P51996) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TRS23_YEAST
Isoform
PDB entities 5
Chains and sequence ranges Author chain E; PDBConstruct 1–219; UniProt 1–219 Author chain R; PDBConstruct 1–219; UniProt 1–219

Trafficking protein particle complex subunit 31

Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

UniProt Q03337

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 24 TRAPP-associated protein TCA17 × 2 (P32613) Trafficking protein particle complex subunit 33 × 2 (Q99394) Trafficking protein particle complex subunit BET3 × 4 (P36149) Trafficking protein particle complex subunit BET5 × 2 (Q03630) Trafficking protein particle complex subunit 23 × 2 (Q03784) Trafficking protein particle complex subunit 20 × 2 (P38334) Trafficking protein particle complex II-specific subunit 130 × 2 (Q03660) Trafficking protein particle complex II-specific subunit 120 × 2 (Q04183) Trafficking protein particle complex II-specific subunit 65 × 2 (P32893) GTP-binding protein YPT32/YPT11 × 2 (P51996) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TRS31_YEAST
Isoform
PDB entities 6
Chains and sequence ranges Author chain G; PDBConstruct 1–283; UniProt 1–283 Author chain T; PDBConstruct 1–283; UniProt 1–283

Trafficking protein particle complex subunit 20

Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

UniProt P38334

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 24 TRAPP-associated protein TCA17 × 2 (P32613) Trafficking protein particle complex subunit 33 × 2 (Q99394) Trafficking protein particle complex subunit BET3 × 4 (P36149) Trafficking protein particle complex subunit BET5 × 2 (Q03630) Trafficking protein particle complex subunit 23 × 2 (Q03784) Trafficking protein particle complex subunit 31 × 2 (Q03337) Trafficking protein particle complex II-specific subunit 130 × 2 (Q03660) Trafficking protein particle complex II-specific subunit 120 × 2 (Q04183) Trafficking protein particle complex II-specific subunit 65 × 2 (P32893) GTP-binding protein YPT32/YPT11 × 2 (P51996) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TRS20_YEAST
Isoform
PDB entities 7
Chains and sequence ranges Author chain H; PDBConstruct 1–175; UniProt 1–175 Author chain U; PDBConstruct 1–175; UniProt 1–175

Trafficking protein particle complex II-specific subunit 130

Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

UniProt Q03660

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 24 TRAPP-associated protein TCA17 × 2 (P32613) Trafficking protein particle complex subunit 33 × 2 (Q99394) Trafficking protein particle complex subunit BET3 × 4 (P36149) Trafficking protein particle complex subunit BET5 × 2 (Q03630) Trafficking protein particle complex subunit 23 × 2 (Q03784) Trafficking protein particle complex subunit 31 × 2 (Q03337) Trafficking protein particle complex subunit 20 × 2 (P38334) Trafficking protein particle complex II-specific subunit 120 × 2 (Q04183) Trafficking protein particle complex II-specific subunit 65 × 2 (P32893) GTP-binding protein YPT32/YPT11 × 2 (P51996) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TR130_YEAST
Isoform
PDB entities 8
Chains and sequence ranges Author chain I; PDBConstruct 1–1102; UniProt 1–1102 Author chain V; PDBConstruct 1–1102; UniProt 1–1102

Trafficking protein particle complex II-specific subunit 120

Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

UniProt Q04183

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 24 TRAPP-associated protein TCA17 × 2 (P32613) Trafficking protein particle complex subunit 33 × 2 (Q99394) Trafficking protein particle complex subunit BET3 × 4 (P36149) Trafficking protein particle complex subunit BET5 × 2 (Q03630) Trafficking protein particle complex subunit 23 × 2 (Q03784) Trafficking protein particle complex subunit 31 × 2 (Q03337) Trafficking protein particle complex subunit 20 × 2 (P38334) Trafficking protein particle complex II-specific subunit 130 × 2 (Q03660) Trafficking protein particle complex II-specific subunit 65 × 2 (P32893) GTP-binding protein YPT32/YPT11 × 2 (P51996) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TR120_YEAST
Isoform
PDB entities 9
Chains and sequence ranges Author chain J; PDBConstruct 1–1289; UniProt 1–1289 Author chain W; PDBConstruct 1–1289; UniProt 1–1289

Trafficking protein particle complex II-specific subunit 65

Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

UniProt P32893

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 24 TRAPP-associated protein TCA17 × 2 (P32613) Trafficking protein particle complex subunit 33 × 2 (Q99394) Trafficking protein particle complex subunit BET3 × 4 (P36149) Trafficking protein particle complex subunit BET5 × 2 (Q03630) Trafficking protein particle complex subunit 23 × 2 (Q03784) Trafficking protein particle complex subunit 31 × 2 (Q03337) Trafficking protein particle complex subunit 20 × 2 (P38334) Trafficking protein particle complex II-specific subunit 130 × 2 (Q03660) Trafficking protein particle complex II-specific subunit 120 × 2 (Q04183) GTP-binding protein YPT32/YPT11 × 2 (P51996) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name TRS65_YEAST
Isoform
PDB entities 10
Chains and sequence ranges Author chain K; PDBConstruct 1–560; UniProt 1–560 Author chain X; PDBConstruct 1–560; UniProt 1–560

GTP-binding protein YPT32/YPT11

Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

UniProt P51996

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 24 TRAPP-associated protein TCA17 × 2 (P32613) Trafficking protein particle complex subunit 33 × 2 (Q99394) Trafficking protein particle complex subunit BET3 × 4 (P36149) Trafficking protein particle complex subunit BET5 × 2 (Q03630) Trafficking protein particle complex subunit 23 × 2 (Q03784) Trafficking protein particle complex subunit 31 × 2 (Q03337) Trafficking protein particle complex subunit 20 × 2 (P38334) Trafficking protein particle complex II-specific subunit 130 × 2 (Q03660) Trafficking protein particle complex II-specific subunit 120 × 2 (Q04183) Trafficking protein particle complex II-specific subunit 65 × 2 (P32893) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name YPT32_YEAST
Isoform
PDB entities 11
Chains and sequence ranges Author chain L; PDBConstruct 1–222; UniProt 1–222 Author chain Y; PDBConstruct 1–222; UniProt 1–222

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

2. Structure Basics 2. Structure Basics

Entry ID entry_id7ea3
Deposition date deposition_date2021-03-06
Structure title titleIntact Ypt32-TRAPPII (dimer).
Keywords keywordsComplex, TRANSPORT PROTEIN; TRANSPORT PROTEIN
Experimental Method methodELECTRON MICROSCOPY

3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

7ea3__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

7ea3__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

7ea3__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)98.26 Å
Rg (electron density)97.25 Å
Total Rg96.68 Å
Atom count49714
Residues6974
Excluded volume873280 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 7ea3__assembly_1__model_1 24-meric (24) Success 4.1.3-1-20251215 (887e7ef) View Download

4. Crystallography and Experiment 4. Crystallography & Experiment

5. Entities and Polymers Entities & Polymers (11)

7. Citations (1)