8p6p

Mycoplasma pneumoniae small ribosomal subunit in chloramphenicol-treated cells

Method: ELECTRON MICROSCOPY

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1. Protein Identity and Related Structures Protein Identity & Related Structures

30S ribosomal protein S2

OrganismNot specified

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 21 RNA 5	23S ribosomal RNA × 1 16S ribosomal RNA × 1 tRNA-Asp (P-site) × 1 tRNA-Lys (A-site) × 1 30S ribosomal protein S3 × 1 （P41205） 30S ribosomal protein S4 × 1 （P46775） 30S ribosomal protein S5 × 1 （Q50301） 30S ribosomal protein S6 × 1 （P75543） 30S ribosomal protein S7 × 1 （P75545） 30S ribosomal protein S8 × 1 （Q50304） 30S ribosomal protein S9 × 1 （P75179） 30S ribosomal protein S10 × 1 （P75581） 30S ribosomal protein S11 × 1 （Q50296） 30S ribosomal protein S12 × 1 （P75546） 30S ribosomal protein S13 × 1 （Q50297） 30S ribosomal protein S14 type Z × 1 （Q50305） 30S ribosomal protein S15 × 1 （P75173） 30S ribosomal protein S16 × 1 （A0A0H3DLS7） 30S ribosomal protein S17 × 1 （Q50309） 30S ribosomal protein S18 × 1 （P75541） 30S ribosomal protein S19 × 1 （P75576） 30S ribosomal protein S20 × 1 （P75237） 30S ribosomal protein S21 × 1 （P57079） mRNA × 1 50S ribosomal protein L31 × 1 （P78020） SPERMIDINE × 2 1,4-DIAMINOBUTANE × 2 PENTANE-1,5-DIAMINE × 1 MAGNESIUM ION × 103 ZINC ION × 2 water × 2	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS2_MYCPN
Isoform	—
PDB entities	5
Chains and sequence ranges	Author chain A； PDBConstruct 1–294； UniProt 1–294

30S ribosomal protein S3

OrganismNot specified

UniProt P41205

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 21 RNA 5	23S ribosomal RNA × 1 16S ribosomal RNA × 1 tRNA-Asp (P-site) × 1 tRNA-Lys (A-site) × 1 30S ribosomal protein S2 × 1 （P75560） 30S ribosomal protein S4 × 1 （P46775） 30S ribosomal protein S5 × 1 （Q50301） 30S ribosomal protein S6 × 1 （P75543） 30S ribosomal protein S7 × 1 （P75545） 30S ribosomal protein S8 × 1 （Q50304） 30S ribosomal protein S9 × 1 （P75179） 30S ribosomal protein S10 × 1 （P75581） 30S ribosomal protein S11 × 1 （Q50296） 30S ribosomal protein S12 × 1 （P75546） 30S ribosomal protein S13 × 1 （Q50297） 30S ribosomal protein S14 type Z × 1 （Q50305） 30S ribosomal protein S15 × 1 （P75173） 30S ribosomal protein S16 × 1 （A0A0H3DLS7） 30S ribosomal protein S17 × 1 （Q50309） 30S ribosomal protein S18 × 1 （P75541） 30S ribosomal protein S19 × 1 （P75576） 30S ribosomal protein S20 × 1 （P75237） 30S ribosomal protein S21 × 1 （P57079） mRNA × 1 50S ribosomal protein L31 × 1 （P78020） SPERMIDINE × 2 1,4-DIAMINOBUTANE × 2 PENTANE-1,5-DIAMINE × 1 MAGNESIUM ION × 103 ZINC ION × 2 water × 2	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS3_MYCPN
Isoform	—
PDB entities	6
Chains and sequence ranges	Author chain B； PDBConstruct 1–273； UniProt 1–273

30S ribosomal protein S4

OrganismNot specified

UniProt P46775

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 21 RNA 5	23S ribosomal RNA × 1 16S ribosomal RNA × 1 tRNA-Asp (P-site) × 1 tRNA-Lys (A-site) × 1 30S ribosomal protein S2 × 1 （P75560） 30S ribosomal protein S3 × 1 （P41205） 30S ribosomal protein S5 × 1 （Q50301） 30S ribosomal protein S6 × 1 （P75543） 30S ribosomal protein S7 × 1 （P75545） 30S ribosomal protein S8 × 1 （Q50304） 30S ribosomal protein S9 × 1 （P75179） 30S ribosomal protein S10 × 1 （P75581） 30S ribosomal protein S11 × 1 （Q50296） 30S ribosomal protein S12 × 1 （P75546） 30S ribosomal protein S13 × 1 （Q50297） 30S ribosomal protein S14 type Z × 1 （Q50305） 30S ribosomal protein S15 × 1 （P75173） 30S ribosomal protein S16 × 1 （A0A0H3DLS7） 30S ribosomal protein S17 × 1 （Q50309） 30S ribosomal protein S18 × 1 （P75541） 30S ribosomal protein S19 × 1 （P75576） 30S ribosomal protein S20 × 1 （P75237） 30S ribosomal protein S21 × 1 （P57079） mRNA × 1 50S ribosomal protein L31 × 1 （P78020） SPERMIDINE × 2 1,4-DIAMINOBUTANE × 2 PENTANE-1,5-DIAMINE × 1 MAGNESIUM ION × 103 ZINC ION × 2 water × 2	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS4_MYCPN
Isoform	—
PDB entities	7
Chains and sequence ranges	Author chain C； PDBConstruct 1–205； UniProt 1–205

30S ribosomal protein S5

OrganismNot specified

UniProt Q50301

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 21 RNA 5	23S ribosomal RNA × 1 16S ribosomal RNA × 1 tRNA-Asp (P-site) × 1 tRNA-Lys (A-site) × 1 30S ribosomal protein S2 × 1 （P75560） 30S ribosomal protein S3 × 1 （P41205） 30S ribosomal protein S4 × 1 （P46775） 30S ribosomal protein S6 × 1 （P75543） 30S ribosomal protein S7 × 1 （P75545） 30S ribosomal protein S8 × 1 （Q50304） 30S ribosomal protein S9 × 1 （P75179） 30S ribosomal protein S10 × 1 （P75581） 30S ribosomal protein S11 × 1 （Q50296） 30S ribosomal protein S12 × 1 （P75546） 30S ribosomal protein S13 × 1 （Q50297） 30S ribosomal protein S14 type Z × 1 （Q50305） 30S ribosomal protein S15 × 1 （P75173） 30S ribosomal protein S16 × 1 （A0A0H3DLS7） 30S ribosomal protein S17 × 1 （Q50309） 30S ribosomal protein S18 × 1 （P75541） 30S ribosomal protein S19 × 1 （P75576） 30S ribosomal protein S20 × 1 （P75237） 30S ribosomal protein S21 × 1 （P57079） mRNA × 1 50S ribosomal protein L31 × 1 （P78020） SPERMIDINE × 2 1,4-DIAMINOBUTANE × 2 PENTANE-1,5-DIAMINE × 1 MAGNESIUM ION × 103 ZINC ION × 2 water × 2	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS5_MYCPN
Isoform	—
PDB entities	8
Chains and sequence ranges	Author chain D； PDBConstruct 1–219； UniProt 1–219

30S ribosomal protein S6

OrganismNot specified

UniProt P75543

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 21 RNA 5	23S ribosomal RNA × 1 16S ribosomal RNA × 1 tRNA-Asp (P-site) × 1 tRNA-Lys (A-site) × 1 30S ribosomal protein S2 × 1 （P75560） 30S ribosomal protein S3 × 1 （P41205） 30S ribosomal protein S4 × 1 （P46775） 30S ribosomal protein S5 × 1 （Q50301） 30S ribosomal protein S7 × 1 （P75545） 30S ribosomal protein S8 × 1 （Q50304） 30S ribosomal protein S9 × 1 （P75179） 30S ribosomal protein S10 × 1 （P75581） 30S ribosomal protein S11 × 1 （Q50296） 30S ribosomal protein S12 × 1 （P75546） 30S ribosomal protein S13 × 1 （Q50297） 30S ribosomal protein S14 type Z × 1 （Q50305） 30S ribosomal protein S15 × 1 （P75173） 30S ribosomal protein S16 × 1 （A0A0H3DLS7） 30S ribosomal protein S17 × 1 （Q50309） 30S ribosomal protein S18 × 1 （P75541） 30S ribosomal protein S19 × 1 （P75576） 30S ribosomal protein S20 × 1 （P75237） 30S ribosomal protein S21 × 1 （P57079） mRNA × 1 50S ribosomal protein L31 × 1 （P78020） SPERMIDINE × 2 1,4-DIAMINOBUTANE × 2 PENTANE-1,5-DIAMINE × 1 MAGNESIUM ION × 103 ZINC ION × 2 water × 2	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS6_MYCPN
Isoform	—
PDB entities	9
Chains and sequence ranges	Author chain E； PDBConstruct 1–215； UniProt 1–215

30S ribosomal protein S7

OrganismNot specified

UniProt P75545

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 21 RNA 5	23S ribosomal RNA × 1 16S ribosomal RNA × 1 tRNA-Asp (P-site) × 1 tRNA-Lys (A-site) × 1 30S ribosomal protein S2 × 1 （P75560） 30S ribosomal protein S3 × 1 （P41205） 30S ribosomal protein S4 × 1 （P46775） 30S ribosomal protein S5 × 1 （Q50301） 30S ribosomal protein S6 × 1 （P75543） 30S ribosomal protein S8 × 1 （Q50304） 30S ribosomal protein S9 × 1 （P75179） 30S ribosomal protein S10 × 1 （P75581） 30S ribosomal protein S11 × 1 （Q50296） 30S ribosomal protein S12 × 1 （P75546） 30S ribosomal protein S13 × 1 （Q50297） 30S ribosomal protein S14 type Z × 1 （Q50305） 30S ribosomal protein S15 × 1 （P75173） 30S ribosomal protein S16 × 1 （A0A0H3DLS7） 30S ribosomal protein S17 × 1 （Q50309） 30S ribosomal protein S18 × 1 （P75541） 30S ribosomal protein S19 × 1 （P75576） 30S ribosomal protein S20 × 1 （P75237） 30S ribosomal protein S21 × 1 （P57079） mRNA × 1 50S ribosomal protein L31 × 1 （P78020） SPERMIDINE × 2 1,4-DIAMINOBUTANE × 2 PENTANE-1,5-DIAMINE × 1 MAGNESIUM ION × 103 ZINC ION × 2 water × 2	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS7_MYCPN
Isoform	—
PDB entities	10
Chains and sequence ranges	Author chain F； PDBConstruct 1–155； UniProt 1–155

30S ribosomal protein S8

OrganismNot specified

UniProt Q50304

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 21 RNA 5	23S ribosomal RNA × 1 16S ribosomal RNA × 1 tRNA-Asp (P-site) × 1 tRNA-Lys (A-site) × 1 30S ribosomal protein S2 × 1 （P75560） 30S ribosomal protein S3 × 1 （P41205） 30S ribosomal protein S4 × 1 （P46775） 30S ribosomal protein S5 × 1 （Q50301） 30S ribosomal protein S6 × 1 （P75543） 30S ribosomal protein S7 × 1 （P75545） 30S ribosomal protein S9 × 1 （P75179） 30S ribosomal protein S10 × 1 （P75581） 30S ribosomal protein S11 × 1 （Q50296） 30S ribosomal protein S12 × 1 （P75546） 30S ribosomal protein S13 × 1 （Q50297） 30S ribosomal protein S14 type Z × 1 （Q50305） 30S ribosomal protein S15 × 1 （P75173） 30S ribosomal protein S16 × 1 （A0A0H3DLS7） 30S ribosomal protein S17 × 1 （Q50309） 30S ribosomal protein S18 × 1 （P75541） 30S ribosomal protein S19 × 1 （P75576） 30S ribosomal protein S20 × 1 （P75237） 30S ribosomal protein S21 × 1 （P57079） mRNA × 1 50S ribosomal protein L31 × 1 （P78020） SPERMIDINE × 2 1,4-DIAMINOBUTANE × 2 PENTANE-1,5-DIAMINE × 1 MAGNESIUM ION × 103 ZINC ION × 2 water × 2	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS8_MYCPN
Isoform	—
PDB entities	11
Chains and sequence ranges	Author chain G； PDBConstruct 1–142； UniProt 1–142

30S ribosomal protein S9

OrganismNot specified

UniProt P75179

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 21 RNA 5	23S ribosomal RNA × 1 16S ribosomal RNA × 1 tRNA-Asp (P-site) × 1 tRNA-Lys (A-site) × 1 30S ribosomal protein S2 × 1 （P75560） 30S ribosomal protein S3 × 1 （P41205） 30S ribosomal protein S4 × 1 （P46775） 30S ribosomal protein S5 × 1 （Q50301） 30S ribosomal protein S6 × 1 （P75543） 30S ribosomal protein S7 × 1 （P75545） 30S ribosomal protein S8 × 1 （Q50304） 30S ribosomal protein S10 × 1 （P75581） 30S ribosomal protein S11 × 1 （Q50296） 30S ribosomal protein S12 × 1 （P75546） 30S ribosomal protein S13 × 1 （Q50297） 30S ribosomal protein S14 type Z × 1 （Q50305） 30S ribosomal protein S15 × 1 （P75173） 30S ribosomal protein S16 × 1 （A0A0H3DLS7） 30S ribosomal protein S17 × 1 （Q50309） 30S ribosomal protein S18 × 1 （P75541） 30S ribosomal protein S19 × 1 （P75576） 30S ribosomal protein S20 × 1 （P75237） 30S ribosomal protein S21 × 1 （P57079） mRNA × 1 50S ribosomal protein L31 × 1 （P78020） SPERMIDINE × 2 1,4-DIAMINOBUTANE × 2 PENTANE-1,5-DIAMINE × 1 MAGNESIUM ION × 103 ZINC ION × 2 water × 2	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS9_MYCPN
Isoform	—
PDB entities	12
Chains and sequence ranges	Author chain H； PDBConstruct 1–132； UniProt 1–132

30S ribosomal protein S10

OrganismNot specified

UniProt P75581

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 21 RNA 5	23S ribosomal RNA × 1 16S ribosomal RNA × 1 tRNA-Asp (P-site) × 1 tRNA-Lys (A-site) × 1 30S ribosomal protein S2 × 1 （P75560） 30S ribosomal protein S3 × 1 （P41205） 30S ribosomal protein S4 × 1 （P46775） 30S ribosomal protein S5 × 1 （Q50301） 30S ribosomal protein S6 × 1 （P75543） 30S ribosomal protein S7 × 1 （P75545） 30S ribosomal protein S8 × 1 （Q50304） 30S ribosomal protein S9 × 1 （P75179） 30S ribosomal protein S11 × 1 （Q50296） 30S ribosomal protein S12 × 1 （P75546） 30S ribosomal protein S13 × 1 （Q50297） 30S ribosomal protein S14 type Z × 1 （Q50305） 30S ribosomal protein S15 × 1 （P75173） 30S ribosomal protein S16 × 1 （A0A0H3DLS7） 30S ribosomal protein S17 × 1 （Q50309） 30S ribosomal protein S18 × 1 （P75541） 30S ribosomal protein S19 × 1 （P75576） 30S ribosomal protein S20 × 1 （P75237） 30S ribosomal protein S21 × 1 （P57079） mRNA × 1 50S ribosomal protein L31 × 1 （P78020） SPERMIDINE × 2 1,4-DIAMINOBUTANE × 2 PENTANE-1,5-DIAMINE × 1 MAGNESIUM ION × 103 ZINC ION × 2 water × 2	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS10_MYCPN
Isoform	—
PDB entities	13
Chains and sequence ranges	Author chain I； PDBConstruct 1–108； UniProt 1–108

30S ribosomal protein S11

OrganismNot specified

UniProt Q50296

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 21 RNA 5	23S ribosomal RNA × 1 16S ribosomal RNA × 1 tRNA-Asp (P-site) × 1 tRNA-Lys (A-site) × 1 30S ribosomal protein S2 × 1 （P75560） 30S ribosomal protein S3 × 1 （P41205） 30S ribosomal protein S4 × 1 （P46775） 30S ribosomal protein S5 × 1 （Q50301） 30S ribosomal protein S6 × 1 （P75543） 30S ribosomal protein S7 × 1 （P75545） 30S ribosomal protein S8 × 1 （Q50304） 30S ribosomal protein S9 × 1 （P75179） 30S ribosomal protein S10 × 1 （P75581） 30S ribosomal protein S12 × 1 （P75546） 30S ribosomal protein S13 × 1 （Q50297） 30S ribosomal protein S14 type Z × 1 （Q50305） 30S ribosomal protein S15 × 1 （P75173） 30S ribosomal protein S16 × 1 （A0A0H3DLS7） 30S ribosomal protein S17 × 1 （Q50309） 30S ribosomal protein S18 × 1 （P75541） 30S ribosomal protein S19 × 1 （P75576） 30S ribosomal protein S20 × 1 （P75237） 30S ribosomal protein S21 × 1 （P57079） mRNA × 1 50S ribosomal protein L31 × 1 （P78020） SPERMIDINE × 2 1,4-DIAMINOBUTANE × 2 PENTANE-1,5-DIAMINE × 1 MAGNESIUM ION × 103 ZINC ION × 2 water × 2	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS11_MYCPN
Isoform	—
PDB entities	14
Chains and sequence ranges	Author chain J； PDBConstruct 1–121； UniProt 1–121

30S ribosomal protein S12

OrganismNot specified

UniProt P75546

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 21 RNA 5	23S ribosomal RNA × 1 16S ribosomal RNA × 1 tRNA-Asp (P-site) × 1 tRNA-Lys (A-site) × 1 30S ribosomal protein S2 × 1 （P75560） 30S ribosomal protein S3 × 1 （P41205） 30S ribosomal protein S4 × 1 （P46775） 30S ribosomal protein S5 × 1 （Q50301） 30S ribosomal protein S6 × 1 （P75543） 30S ribosomal protein S7 × 1 （P75545） 30S ribosomal protein S8 × 1 （Q50304） 30S ribosomal protein S9 × 1 （P75179） 30S ribosomal protein S10 × 1 （P75581） 30S ribosomal protein S11 × 1 （Q50296） 30S ribosomal protein S13 × 1 （Q50297） 30S ribosomal protein S14 type Z × 1 （Q50305） 30S ribosomal protein S15 × 1 （P75173） 30S ribosomal protein S16 × 1 （A0A0H3DLS7） 30S ribosomal protein S17 × 1 （Q50309） 30S ribosomal protein S18 × 1 （P75541） 30S ribosomal protein S19 × 1 （P75576） 30S ribosomal protein S20 × 1 （P75237） 30S ribosomal protein S21 × 1 （P57079） mRNA × 1 50S ribosomal protein L31 × 1 （P78020） SPERMIDINE × 2 1,4-DIAMINOBUTANE × 2 PENTANE-1,5-DIAMINE × 1 MAGNESIUM ION × 103 ZINC ION × 2 water × 2	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS12_MYCPN
Isoform	—
PDB entities	15
Chains and sequence ranges	Author chain K； PDBConstruct 1–139； UniProt 1–139

30S ribosomal protein S13

OrganismNot specified

UniProt Q50297

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 21 RNA 5	23S ribosomal RNA × 1 16S ribosomal RNA × 1 tRNA-Asp (P-site) × 1 tRNA-Lys (A-site) × 1 30S ribosomal protein S2 × 1 （P75560） 30S ribosomal protein S3 × 1 （P41205） 30S ribosomal protein S4 × 1 （P46775） 30S ribosomal protein S5 × 1 （Q50301） 30S ribosomal protein S6 × 1 （P75543） 30S ribosomal protein S7 × 1 （P75545） 30S ribosomal protein S8 × 1 （Q50304） 30S ribosomal protein S9 × 1 （P75179） 30S ribosomal protein S10 × 1 （P75581） 30S ribosomal protein S11 × 1 （Q50296） 30S ribosomal protein S12 × 1 （P75546） 30S ribosomal protein S14 type Z × 1 （Q50305） 30S ribosomal protein S15 × 1 （P75173） 30S ribosomal protein S16 × 1 （A0A0H3DLS7） 30S ribosomal protein S17 × 1 （Q50309） 30S ribosomal protein S18 × 1 （P75541） 30S ribosomal protein S19 × 1 （P75576） 30S ribosomal protein S20 × 1 （P75237） 30S ribosomal protein S21 × 1 （P57079） mRNA × 1 50S ribosomal protein L31 × 1 （P78020） SPERMIDINE × 2 1,4-DIAMINOBUTANE × 2 PENTANE-1,5-DIAMINE × 1 MAGNESIUM ION × 103 ZINC ION × 2 water × 2	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS13_MYCPN
Isoform	—
PDB entities	16
Chains and sequence ranges	Author chain L； PDBConstruct 1–124； UniProt 1–124

30S ribosomal protein S14 type Z

OrganismNot specified

UniProt Q50305

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 21 RNA 5	23S ribosomal RNA × 1 16S ribosomal RNA × 1 tRNA-Asp (P-site) × 1 tRNA-Lys (A-site) × 1 30S ribosomal protein S2 × 1 （P75560） 30S ribosomal protein S3 × 1 （P41205） 30S ribosomal protein S4 × 1 （P46775） 30S ribosomal protein S5 × 1 （Q50301） 30S ribosomal protein S6 × 1 （P75543） 30S ribosomal protein S7 × 1 （P75545） 30S ribosomal protein S8 × 1 （Q50304） 30S ribosomal protein S9 × 1 （P75179） 30S ribosomal protein S10 × 1 （P75581） 30S ribosomal protein S11 × 1 （Q50296） 30S ribosomal protein S12 × 1 （P75546） 30S ribosomal protein S13 × 1 （Q50297） 30S ribosomal protein S15 × 1 （P75173） 30S ribosomal protein S16 × 1 （A0A0H3DLS7） 30S ribosomal protein S17 × 1 （Q50309） 30S ribosomal protein S18 × 1 （P75541） 30S ribosomal protein S19 × 1 （P75576） 30S ribosomal protein S20 × 1 （P75237） 30S ribosomal protein S21 × 1 （P57079） mRNA × 1 50S ribosomal protein L31 × 1 （P78020） SPERMIDINE × 2 1,4-DIAMINOBUTANE × 2 PENTANE-1,5-DIAMINE × 1 MAGNESIUM ION × 103 ZINC ION × 2 water × 2	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS14Z_MYCPN
Isoform	—
PDB entities	17
Chains and sequence ranges	Author chain M； PDBConstruct 1–61； UniProt 1–61

30S ribosomal protein S15

OrganismNot specified

UniProt P75173

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 21 RNA 5	23S ribosomal RNA × 1 16S ribosomal RNA × 1 tRNA-Asp (P-site) × 1 tRNA-Lys (A-site) × 1 30S ribosomal protein S2 × 1 （P75560） 30S ribosomal protein S3 × 1 （P41205） 30S ribosomal protein S4 × 1 （P46775） 30S ribosomal protein S5 × 1 （Q50301） 30S ribosomal protein S6 × 1 （P75543） 30S ribosomal protein S7 × 1 （P75545） 30S ribosomal protein S8 × 1 （Q50304） 30S ribosomal protein S9 × 1 （P75179） 30S ribosomal protein S10 × 1 （P75581） 30S ribosomal protein S11 × 1 （Q50296） 30S ribosomal protein S12 × 1 （P75546） 30S ribosomal protein S13 × 1 （Q50297） 30S ribosomal protein S14 type Z × 1 （Q50305） 30S ribosomal protein S16 × 1 （A0A0H3DLS7） 30S ribosomal protein S17 × 1 （Q50309） 30S ribosomal protein S18 × 1 （P75541） 30S ribosomal protein S19 × 1 （P75576） 30S ribosomal protein S20 × 1 （P75237） 30S ribosomal protein S21 × 1 （P57079） mRNA × 1 50S ribosomal protein L31 × 1 （P78020） SPERMIDINE × 2 1,4-DIAMINOBUTANE × 2 PENTANE-1,5-DIAMINE × 1 MAGNESIUM ION × 103 ZINC ION × 2 water × 2	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS15_MYCPN
Isoform	—
PDB entities	18
Chains and sequence ranges	Author chain N； PDBConstruct 1–86； UniProt 1–86

30S ribosomal protein S16

OrganismNot specified

UniProt A0A0H3DLS7

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 21 RNA 5	23S ribosomal RNA × 1 16S ribosomal RNA × 1 tRNA-Asp (P-site) × 1 tRNA-Lys (A-site) × 1 30S ribosomal protein S2 × 1 （P75560） 30S ribosomal protein S3 × 1 （P41205） 30S ribosomal protein S4 × 1 （P46775） 30S ribosomal protein S5 × 1 （Q50301） 30S ribosomal protein S6 × 1 （P75543） 30S ribosomal protein S7 × 1 （P75545） 30S ribosomal protein S8 × 1 （Q50304） 30S ribosomal protein S9 × 1 （P75179） 30S ribosomal protein S10 × 1 （P75581） 30S ribosomal protein S11 × 1 （Q50296） 30S ribosomal protein S12 × 1 （P75546） 30S ribosomal protein S13 × 1 （Q50297） 30S ribosomal protein S14 type Z × 1 （Q50305） 30S ribosomal protein S15 × 1 （P75173） 30S ribosomal protein S17 × 1 （Q50309） 30S ribosomal protein S18 × 1 （P75541） 30S ribosomal protein S19 × 1 （P75576） 30S ribosomal protein S20 × 1 （P75237） 30S ribosomal protein S21 × 1 （P57079） mRNA × 1 50S ribosomal protein L31 × 1 （P78020） SPERMIDINE × 2 1,4-DIAMINOBUTANE × 2 PENTANE-1,5-DIAMINE × 1 MAGNESIUM ION × 103 ZINC ION × 2 water × 2	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	A0A0H3DLS7_MYCPB
Isoform	—
PDB entities	19
Chains and sequence ranges	Author chain O； PDBConstruct 1–94； UniProt 1–94

30S ribosomal protein S17

OrganismNot specified

UniProt Q50309

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 21 RNA 5	23S ribosomal RNA × 1 16S ribosomal RNA × 1 tRNA-Asp (P-site) × 1 tRNA-Lys (A-site) × 1 30S ribosomal protein S2 × 1 （P75560） 30S ribosomal protein S3 × 1 （P41205） 30S ribosomal protein S4 × 1 （P46775） 30S ribosomal protein S5 × 1 （Q50301） 30S ribosomal protein S6 × 1 （P75543） 30S ribosomal protein S7 × 1 （P75545） 30S ribosomal protein S8 × 1 （Q50304） 30S ribosomal protein S9 × 1 （P75179） 30S ribosomal protein S10 × 1 （P75581） 30S ribosomal protein S11 × 1 （Q50296） 30S ribosomal protein S12 × 1 （P75546） 30S ribosomal protein S13 × 1 （Q50297） 30S ribosomal protein S14 type Z × 1 （Q50305） 30S ribosomal protein S15 × 1 （P75173） 30S ribosomal protein S16 × 1 （A0A0H3DLS7） 30S ribosomal protein S18 × 1 （P75541） 30S ribosomal protein S19 × 1 （P75576） 30S ribosomal protein S20 × 1 （P75237） 30S ribosomal protein S21 × 1 （P57079） mRNA × 1 50S ribosomal protein L31 × 1 （P78020） SPERMIDINE × 2 1,4-DIAMINOBUTANE × 2 PENTANE-1,5-DIAMINE × 1 MAGNESIUM ION × 103 ZINC ION × 2 water × 2	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS17_MYCPN
Isoform	—
PDB entities	20
Chains and sequence ranges	Author chain P； PDBConstruct 1–85； UniProt 1–85

30S ribosomal protein S18

OrganismNot specified

UniProt P75541

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 21 RNA 5	23S ribosomal RNA × 1 16S ribosomal RNA × 1 tRNA-Asp (P-site) × 1 tRNA-Lys (A-site) × 1 30S ribosomal protein S2 × 1 （P75560） 30S ribosomal protein S3 × 1 （P41205） 30S ribosomal protein S4 × 1 （P46775） 30S ribosomal protein S5 × 1 （Q50301） 30S ribosomal protein S6 × 1 （P75543） 30S ribosomal protein S7 × 1 （P75545） 30S ribosomal protein S8 × 1 （Q50304） 30S ribosomal protein S9 × 1 （P75179） 30S ribosomal protein S10 × 1 （P75581） 30S ribosomal protein S11 × 1 （Q50296） 30S ribosomal protein S12 × 1 （P75546） 30S ribosomal protein S13 × 1 （Q50297） 30S ribosomal protein S14 type Z × 1 （Q50305） 30S ribosomal protein S15 × 1 （P75173） 30S ribosomal protein S16 × 1 （A0A0H3DLS7） 30S ribosomal protein S17 × 1 （Q50309） 30S ribosomal protein S19 × 1 （P75576） 30S ribosomal protein S20 × 1 （P75237） 30S ribosomal protein S21 × 1 （P57079） mRNA × 1 50S ribosomal protein L31 × 1 （P78020） SPERMIDINE × 2 1,4-DIAMINOBUTANE × 2 PENTANE-1,5-DIAMINE × 1 MAGNESIUM ION × 103 ZINC ION × 2 water × 2	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS18_MYCPN
Isoform	—
PDB entities	21
Chains and sequence ranges	Author chain Q； PDBConstruct 1–104； UniProt 1–104

30S ribosomal protein S19

OrganismNot specified

UniProt P75576

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 21 RNA 5	23S ribosomal RNA × 1 16S ribosomal RNA × 1 tRNA-Asp (P-site) × 1 tRNA-Lys (A-site) × 1 30S ribosomal protein S2 × 1 （P75560） 30S ribosomal protein S3 × 1 （P41205） 30S ribosomal protein S4 × 1 （P46775） 30S ribosomal protein S5 × 1 （Q50301） 30S ribosomal protein S6 × 1 （P75543） 30S ribosomal protein S7 × 1 （P75545） 30S ribosomal protein S8 × 1 （Q50304） 30S ribosomal protein S9 × 1 （P75179） 30S ribosomal protein S10 × 1 （P75581） 30S ribosomal protein S11 × 1 （Q50296） 30S ribosomal protein S12 × 1 （P75546） 30S ribosomal protein S13 × 1 （Q50297） 30S ribosomal protein S14 type Z × 1 （Q50305） 30S ribosomal protein S15 × 1 （P75173） 30S ribosomal protein S16 × 1 （A0A0H3DLS7） 30S ribosomal protein S17 × 1 （Q50309） 30S ribosomal protein S18 × 1 （P75541） 30S ribosomal protein S20 × 1 （P75237） 30S ribosomal protein S21 × 1 （P57079） mRNA × 1 50S ribosomal protein L31 × 1 （P78020） SPERMIDINE × 2 1,4-DIAMINOBUTANE × 2 PENTANE-1,5-DIAMINE × 1 MAGNESIUM ION × 103 ZINC ION × 2 water × 2	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS19_MYCPN
Isoform	—
PDB entities	22
Chains and sequence ranges	Author chain R； PDBConstruct 1–87； UniProt 1–87

30S ribosomal protein S20

OrganismNot specified

UniProt P75237

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 21 RNA 5	23S ribosomal RNA × 1 16S ribosomal RNA × 1 tRNA-Asp (P-site) × 1 tRNA-Lys (A-site) × 1 30S ribosomal protein S2 × 1 （P75560） 30S ribosomal protein S3 × 1 （P41205） 30S ribosomal protein S4 × 1 （P46775） 30S ribosomal protein S5 × 1 （Q50301） 30S ribosomal protein S6 × 1 （P75543） 30S ribosomal protein S7 × 1 （P75545） 30S ribosomal protein S8 × 1 （Q50304） 30S ribosomal protein S9 × 1 （P75179） 30S ribosomal protein S10 × 1 （P75581） 30S ribosomal protein S11 × 1 （Q50296） 30S ribosomal protein S12 × 1 （P75546） 30S ribosomal protein S13 × 1 （Q50297） 30S ribosomal protein S14 type Z × 1 （Q50305） 30S ribosomal protein S15 × 1 （P75173） 30S ribosomal protein S16 × 1 （A0A0H3DLS7） 30S ribosomal protein S17 × 1 （Q50309） 30S ribosomal protein S18 × 1 （P75541） 30S ribosomal protein S19 × 1 （P75576） 30S ribosomal protein S21 × 1 （P57079） mRNA × 1 50S ribosomal protein L31 × 1 （P78020） SPERMIDINE × 2 1,4-DIAMINOBUTANE × 2 PENTANE-1,5-DIAMINE × 1 MAGNESIUM ION × 103 ZINC ION × 2 water × 2	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS20_MYCPN
Isoform	—
PDB entities	23
Chains and sequence ranges	Author chain S； PDBConstruct 1–87； UniProt 1–87

30S ribosomal protein S21

OrganismNot specified

UniProt P57079

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 21 RNA 5	23S ribosomal RNA × 1 16S ribosomal RNA × 1 tRNA-Asp (P-site) × 1 tRNA-Lys (A-site) × 1 30S ribosomal protein S2 × 1 （P75560） 30S ribosomal protein S3 × 1 （P41205） 30S ribosomal protein S4 × 1 （P46775） 30S ribosomal protein S5 × 1 （Q50301） 30S ribosomal protein S6 × 1 （P75543） 30S ribosomal protein S7 × 1 （P75545） 30S ribosomal protein S8 × 1 （Q50304） 30S ribosomal protein S9 × 1 （P75179） 30S ribosomal protein S10 × 1 （P75581） 30S ribosomal protein S11 × 1 （Q50296） 30S ribosomal protein S12 × 1 （P75546） 30S ribosomal protein S13 × 1 （Q50297） 30S ribosomal protein S14 type Z × 1 （Q50305） 30S ribosomal protein S15 × 1 （P75173） 30S ribosomal protein S16 × 1 （A0A0H3DLS7） 30S ribosomal protein S17 × 1 （Q50309） 30S ribosomal protein S18 × 1 （P75541） 30S ribosomal protein S19 × 1 （P75576） 30S ribosomal protein S20 × 1 （P75237） mRNA × 1 50S ribosomal protein L31 × 1 （P78020） SPERMIDINE × 2 1,4-DIAMINOBUTANE × 2 PENTANE-1,5-DIAMINE × 1 MAGNESIUM ION × 103 ZINC ION × 2 water × 2	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RS21_MYCPN
Isoform	—
PDB entities	24
Chains and sequence ranges	Author chain T； PDBConstruct 1–60； UniProt 1–60

50S ribosomal protein L31

OrganismNot specified

UniProt P78020

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Protein–RNA	Heteromer	Protein 21 RNA 5	23S ribosomal RNA × 1 16S ribosomal RNA × 1 tRNA-Asp (P-site) × 1 tRNA-Lys (A-site) × 1 30S ribosomal protein S2 × 1 （P75560） 30S ribosomal protein S3 × 1 （P41205） 30S ribosomal protein S4 × 1 （P46775） 30S ribosomal protein S5 × 1 （Q50301） 30S ribosomal protein S6 × 1 （P75543） 30S ribosomal protein S7 × 1 （P75545） 30S ribosomal protein S8 × 1 （Q50304） 30S ribosomal protein S9 × 1 （P75179） 30S ribosomal protein S10 × 1 （P75581） 30S ribosomal protein S11 × 1 （Q50296） 30S ribosomal protein S12 × 1 （P75546） 30S ribosomal protein S13 × 1 （Q50297） 30S ribosomal protein S14 type Z × 1 （Q50305） 30S ribosomal protein S15 × 1 （P75173） 30S ribosomal protein S16 × 1 （A0A0H3DLS7） 30S ribosomal protein S17 × 1 （Q50309） 30S ribosomal protein S18 × 1 （P75541） 30S ribosomal protein S19 × 1 （P75576） 30S ribosomal protein S20 × 1 （P75237） 30S ribosomal protein S21 × 1 （P57079） mRNA × 1 SPERMIDINE × 2 1,4-DIAMINOBUTANE × 2 PENTANE-1,5-DIAMINE × 1 MAGNESIUM ION × 103 ZINC ION × 2 water × 2	Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	RL31_MYCPN
Isoform	—
PDB entities	26
Chains and sequence ranges	Author chain x； PDBConstruct 1–97； UniProt 1–97

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id	8p6p
Deposition date deposition_date	2023-05-27
Structure title title	Mycoplasma pneumoniae small ribosomal subunit in chloramphenicol-treated cells
Keywords keywords	In situ, Ribosome, Chloramphenicol, cryo-ET, TRANSLATION; TRANSLATION
Experimental Method method	ELECTRON MICROSCOPY

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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

8p6p__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

8p6p__assembly_1__model_1 | I(q)

100 plotted points; both axes use logarithmic scales.

8p6p__assembly_1__model_1 | P(r) · Pending

P(r) will be calculated and displayed separately for the same assembly/model.

Rg（Guinier）	65.34 Å
Rg (electron density)	65.90 Å
Total Rg	65.91 Å
Atom count	55463
Residues	4204
Excluded volume	865180 Å³
Maximum q	0.500 Å⁻¹

Assembly	Model	Structure unit	Oligomeric description	Status	CRYSOL	Actions
1	1	`8p6p__assembly_1__model_1`	26-meric （26）	Success	4.1.3-1-20251215 (887e7ef)	View Download

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4. Crystallography and Experiment 4. Crystallography & Experiment

▶

5. Entities and Polymers Entities & Polymers (32)

Entity 1 Entity 1 polymer

Description description	23S ribosomal RNA
Molecular weight formula_weight	940911.5 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polyribonucleotide
Chain IDs strand_id	3
Atom count atom_count	55465

UACAAUAAGUUACUAAGGGCUUAUGGUGGAUGCCUUGGCACUAAUAGGCGAUGAAGGACGUGUUAACCUGCGAUAAGCUUCGGGUAGGUGGUAAGAACCUCAGAUCCGGAGAUUUCCGAAUGGAGCAAUCCGGUAGUUGGAAACAGCUAUCAUUAAUUGAUGAAUAAAUAGUCAAUUAAAGCAAUACGUGGUGAAGUGAAACAUCUCAGUAGCCACAGGAAAAGAAAACGAAUGUGAUUCCGUGUGUAGUGGCGAGCGAAAGCGGAACAGGCCAAACUUAUCAUUAGAUAGGGGUUGUAGGGCUUGCAAUGUGGACUUGAAAACGAUAGAAGAAGCUGUUGGAAAGCAGCGCGCAAAAGGGUGAUAGCCCCGUAUUUGAAAUUGUUUUCAUACCUAGCGAGAUCCCUGAGUAGCUCGGAAAACGUUAUUUUGAGUGAAUCUGCCCAGACCAUUGGGUAAGCCUAAAUACUAAUUAGUGACCGAUAGCGAAACAGUACCGUGAGGGAAAGGUGAAAAGAACCCAGAGAUGGGAGUGAAAUAGAUUCUGAAACCAUAUGCCUACAACGUGUCAGAGCACAUUAAUGUGUGAUGGCGUGCGUUUUGAAGUAUGAGCCGGCGAGUUAUGAUAGCAAGCGUUAGUUAACCAGGAGAUGGGGAGCUGUAGCGAAAGCGAGUUUUAAAAGAGCGUUUGUUUGUUAUUAUAGACCCGAAACGGGUUGAGCUAGUCAUGAGCAGGUUGAAGGUUGAGUAACAUCAACUGGAGGACCGAACCGACUCUCGUUGAAACGAUAGCGGAUGACUUGUGAUUAGGGGUGAAAUUCCAAUCGAAAUCCGUGAUAGCUGGUUCUCGUCGAAAUAGCUUUAAGGCUAGCGUGAGAUCACAAAUAAGUGGAGGUAAAGCUACUGAAUGUAUGAUGGCGCCACCUAGGCGUACUGAAUACAAUUAAACUCUGAAUGCCAUUUAUUUUAUUCUCGCAGUCAGACAGUGGGGGAUAAGCUUCAUUGUCAAGAGGGGAAGAGCCCAGAUCAUUAAAUAAGGUCCCCAAAAUAUACUAAGUGGAAAAGGAUGUGAAAGUGCUAAAACAGCAAGGAUGUUGGCUUAGAAGCAGCCAUCGUUUAAAGAGUGCGUAACAGCUCACUUGUCGAGUGUUUUUGCGCCGAAGAUGUAACGGGGCUAAGUAUAUUACCGAAUUUAUGGAUAAGAUUUAUAUCUUGUGGUAGACGAGCGUUGUAUUGGAGUUGAAGUCAAAGCGUGAGCAUUGGUGGAUCCAAUACAAGUGAGAAUGCCGGCAUGAGUAACGCUUGGGAGUGAGAAUCUCCCAAACCGAUUGACUAAGGUUUCCUGGACCAGGGUCGUCCUUCCAGGGUUAGUCUGGACCUAAGCUGAGGCUGAAAAGCGUAGGCGAUGGACAACAGGUUAAUAUUCCUGUACUUACAGUUAGACUGAUGGAGUGACAAAGAAGGUUUUCCACCCCCAUAAUUGGAUUUGGGGAUAAAUCAUAAGGUGGUACAAUAGGCAAAUCCGUUGUGCAUAACAUUGAGUGAUGAUGUCGAGUGAAUGAGUGAUCAAGUAGCGAAGGUGGUAUUAAUCAUGCUUUCAAGAAAAGCUUCUAGGGUUAAUCUAGCUGUAACCAGUACCGAGAACGAACACACGUAGUCAAGGAGAGGAUCCUAAGGUUAGCGAGUGAACUAUAGCCAAGGAACUCUGCAAAUUAACCCCGUAAGUUAGCGAGAAGGGGUGCUUAUGUAAAAGUAAGCCGCAGUGAAGAACGAGGGGGGACUGUUUAACUAAAACACAACUCUAUGCCAAACCGUAAGGUGAUGUAUAUGGGGUGACACCUGCCCAGUGCUGGAAGGUUAAAGAAGGAGGUUAGCGCAAGCGAAGCUUUUAACUGAAGCCCCAGUGAACGGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUAGUCGGGUAAAUUCCGUCCCGCUUGAAUGGUGUAACCAUCUCUUGACUGUCUCGGCUAUAGACUCGGUGAAAUCCAGGUACGGGUGAAGACACCCGUUAGGCGCAACGGGACGGAAAGACCCCGUGAAGCUUUACUGUAGCUUAAUAUUGAUCAGGACAUUAUCAUGUAGAGAAUAGGUAGGAGCAAUCGAUGCAAGUUCGCUAGGACUUGUUGAUGCGAAAGGUGGAAUACUACCCUUGGUUGUGUGCUGUUCUAAUUGGUAACUGUUAUCCAGUUUCAAGACAGUGUUAGGUGGGCAGUUUGACUGGGGCGGUCGCCUCCUAAAAGGUAACGGAGGCGUACAAAGGUACCUUCAGUACGGUUGGAAAUCGUAUGUAGAGUGUAAUGGUGUAAGGGUGCUUGACUGUGAGACAUACAGGUCGAACAGGUGAGAAAUCAGGUCAUAGUGAUCCGGUGGUCCAGUAUGGAAUGGCCAUCGCUCAACGGAUAAAAGCUACUCCGGGGAUAACAGGCUGAUACUGCCCAAGAGUUCAUAUCGACGGCAGUGUUUGGCACCUCGAUGUCGACUCAUCUCAUCCUCGAGCUGAAGCAGGUUCGAAGGGUUCGGCUGUUCGCCGAUUAAAGAGAUACGUGAGUUGGGUUCAAACCGUCGUGAGACAGGUUGGUCCCUAUCUAUUGUGCCCGUAGGAAGAUUGAAGAGUGUUGCUUCUAGUACGAGAGGACCGAAGCGAGGACACCUCUUAUGCUCCAGUUGUAGCGCCAGCUGCACCGCUGGGUAGUAACGUGUCUAUUAGAUAAACGCUGAAAGCAUCUAAGUGUGAAACUAUCUCAAAGAUUAAUCUUCCCAUUUCGCAAGAAAGUAAGAGCCGUCAAAGACGAUGACGUUGAUAGGUUACAGGUGUAAGCAUAGUGAUAUGUUGAGCUGAGUAAUACUAAUUGCUCGAGGACUUAUUGGA

Entity 2 Entity 2 polymer

Description description	16S ribosomal RNA
Molecular weight formula_weight	491326.8 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polyribonucleotide
Chain IDs strand_id	5

UUUUUCUGAGAGUUUGAUCCUGGCUCAGGAUUAACGCUGGCGGCAUGCCUAAUACAUGCAAGUCGAUCGAAAGUAGUAAUACUUUAGAGGCGAACGGGUGAGUAACACGUAUCCAAUCUACCUUAUAAUGGGGGAUAACUAGUUGAAAGACUAGCUAAUACCGCAUAAGAACUUUGGUUCGCAUGAAUCAAAGUUGAAAGGACCUGCAAGGGUUCGUUAUUUGAUGAGGGUGCGCCAUAUCAGCUAGUUGGUGGGGUAACGGCCUACCAAGGCAAUGACGUGUAGCUAUGCUGAGAAGUAGAAUAGCCACAAUGGGACUGAGACACGGCCCAUACUCCUACGGGAGGCAGCAGUAGGGAAUUUUUCACAAUGAGCGAAAGCUUGAUGGAGCAAUGCCGCGUGAACGAUGAAGGUCUUUAAGAUUGUAAAGUUCUUUUAUUUGGGAAGAAUGACUUUAGCAGGUAAUGGCUAGAGUUUGACUGUACCAUUUUGAAUAAGUGACGACUAACUAUGUGCCAGCAGUCGCGGUAAUACAUAGGUCGCAAGCGUUAUCCGGAUUUAUUGGGCGUAAAGCAAGCGCAGGCGGAUUGAAAAGUCUGGUGUUAAAGGCAGCUGCUUAACAGUUGUAUGCAUUGGAAACUAUUAAUCUAGAGUGUGGUAGGGAGUUUUGGAAUUUCAUGUGGAGCGGUGAAAUGCGUAGAUAUAUGAAGGAACACCAGUGGCGAAGGCGAAAACUUAGGCCAUUACUGACGCUUAGGCUUGAAAGUGUGGGGAGCAAAUAGGAUUAGAUACCCUAGUAGUCCACACCGUAAACGAUAGAUACUAGCUGUCGGGGCGAUCCCCUCGGUAGUGAAGUUAACACAUUAAGUAUCUCGCCUGGGUAGUACAUUCGCAAGAAUGAAACUCAAACGGAAUUGACGGGGACCCGCACAAGUGGUGGAGCAUGUUGCUUAAUUCGACGGUACACGAAAAACCUUACCUAGACUUGACAUCCUUGGCAAAAUUAUGGAAACAUAAUGGAGGUUAACCGAGUGACAGGUGGUGCAUGGUUGUCGUCAGCUCGUGUCGUGAGAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCGUUAGUUACAUUGUCUAGCGAGACUGCUAAUGCAAAUUGGAGGAAGGAAGGGAUGACGUCAAAUCAUCAUGCCCCUUAUGUCUAGGGCUGCAAACGUGCUACAAUGGCCAAUACAAACAGUCGCCAGCUUGUAAAAGUGAGCAAAUCUGUAAAGUUGGUCUCAGUUCGGAUUGAGGGCUGCAAUUCGUCCUCAUGAAGUCGGAAUCACUAGUAAUCGCGAAUCAGCUAUGUCGCGGUGAAUACGUUCUCGGGUCUUGUACACACCGCCCGUCAAACUAUGAAAGCUGGUAAUAUUUAAAAACGUGUUGCUAACCAUUAGGAAGCGCAUGUCAAGGAUAGCACCGGUGAUUGGAGUUAAGUCGUAACAAGGUACCCCUACGAGAACGUGGGGGUGGAUCACCUCCUUUCUA

Entity 3 Entity 3 polymer

Description description	tRNA-Asp (P-site)
Molecular weight formula_weight	24136.2 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polyribonucleotide
Chain IDs strand_id	7

GGUUCCAUGGUGUAGUGGAUAACAUAUCUCCCUGUCACGGAGGGGUUGCGGGUUCGAUUCCCGUUGGAACCGCCA

Entity 4 Entity 4 polymer

Description description	tRNA-Lys (A-site)
Molecular weight formula_weight	24401.4 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polyribonucleotide
Chain IDs strand_id	8

GCAUCUUUAGCUCAGUUGGUAGAGCAAAUGACUCUUAAUCAUUGGGUCGGGGGUUCGAGCCCCUCAAGAUGCACCA

Entity 5 Entity 5 polymer

Description description	30S ribosomal protein S2
Molecular weight formula_weight	33468.6 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	A

MSELITTPVETTAKAELVSLAKLGEMRTHVGMVKRYWNPKMGFFIEPERKHNNDHFVLELQRQSLQTAYNYVKEVAQNNGQILFVGTKNDYVKKLVNNIAKRVDVAFITQRWLGGTLTNFKTLSISINKLNKLVEKQAENAADLTKKENLMLSREIERLEKFFGGVKSLKRLPNLLIVDDPVYEKNAVAEANILRIPVVALCNTNTNPELVDFIIPANNHQPQSTCLLMNLLADAVAEAKAMPTMFAYKPDEEIQIEIPQKQEAPRQVVNRANSKQITSQRLNITRNPEVLTRE

Entity 6 Entity 6 polymer

Description description	30S ribosomal protein S3
Molecular weight formula_weight	30657.2 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	B

MGQKVNSNGLRFGINKNWISRWTANSHAQTAKWLIEDEKIRNLFFVNYRNAQVSNVEIERTQATVDVFVYAAQPAFLIGSENKNIQKITKQIKQIIGRTTNLDLTINEIGSPMLSARIIARDLANAIEARVPLRTAMRQSLIKVLKAGANGIKVLVSGRLNGAEIARDKMYIEGNMPLSTLRADIDYALEKAQTTYGVIGVKVWINRGMIYTKGLNRTPAHILHPQKKQPNRQNQQPRHFNQGQVLSANKLTGSDVETSSIQALTKPNKEDKQ

Entity 7 Entity 7 polymer

Description description	30S ribosomal protein S4
Molecular weight formula_weight	23817.6 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	C

MKYTGSIFKRSRRLGFSLLENNKEFSKGKKRKTIPGQHGNRFRSSTMSGYAQQLQEKQRMQYMYGITDKQFRRLFRLVLKQRGNLAVNLFRVLESRLDNIVYRMGFAPTRRSARQLVNHGHVLLNDRTVDTPSIILNPGDKVRLKAKTIKIPIVKAASESGVVSPFVETNNKTFEGTYVRFPERSELPAGINESYVVEWYKRLVK

Entity 8 Entity 8 polymer

Description description	30S ribosomal protein S5
Molecular weight formula_weight	24138.0 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	D

MTDQNQKANQGNGLQTTNLQAHAQRKHNLRPSSEGIKKAVSKKEGGGHNRNNQNRRFQKPAFKSEFEERIVKLKRISKTTKGGRNMRFSVLVVVGNRKGKIGYGIAKALEVPNAIKKAIKAAHNSLHTIEIHKGSIYHEVIGRSGASRVLLKPAPQGTGIIAGGAIRAIIELAGYSDIYTKNLGRNTPINMIHATMDGILKQLSPRRVAILRNKNLNEL

Entity 9 Entity 9 polymer

Description description	30S ribosomal protein S6
Molecular weight formula_weight	25430.5 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	E

MQYNIILLVDGSLSLEQANQVNEKQQQTLTNVEGLQTEYLGLKELAYPIKKQLSAHYYRWKFSGDNQSTKDFKRTANINKQVLRELIINLEREYGYLASINPKKQQLALQKRAKYDEIIARENNPENPDVPVTSGLASTQPRLSRTEKAQKPKEELWDVVQKMGNFDSVQANPYRPRFKRFNAEHVNQRQNQQNNNNNRFDRNRNRQHNRFKDKQ

Entity 10 Entity 10 polymer

Description description	30S ribosomal protein S7
Molecular weight formula_weight	17897.0 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	F

MRKNRAPKRTVLPDPVFNNTLVTRIINVIMEDGKKGLAQRILYGAFDLIEQRTKEKPLTVFERAVGNVMPRLELRVRRIAGSNYQVPTEVPQDRKIALALRWIAMFARKRHEKTMLEKIANEIIDASNNTGAAIKKKDDTHKMAEANKAFAHMRW

Entity 11 Entity 11 polymer

Description description	30S ribosomal protein S8
Molecular weight formula_weight	15903.1 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	G

MITTTKPIKAHFDPVADLLTKINNARKAKLMTVTTIASKLKIAILEILVKEGYLANFQVLENKSKTKRIVTFNLKYTQRRIPSINGVKQISKPGLRIYRPFEKLPLVLNGLGIAIISTSDGVMTDKVARLKKIGGEILAYVW

Entity 12 Entity 12 polymer

Description description	30S ribosomal protein S9
Molecular weight formula_weight	15149.7 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	H

MEKQSYYGLGRRKSSSAKVYLTPTQDKGKITVNRRDPSEYFPNKLVIQDMEQPLDLTDLKKNFDINVVVKGGGFTGQAGAIRLGIVRALLQFNPELKKILKSKKLTTRDKRVKERKKFGLYGARRAPQFTKR

Entity 13 Entity 13 polymer

Description description	30S ribosomal protein S10
Molecular weight formula_weight	12226.6 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	I

MNAANAVKYPELKIKLESYDSTLLDLTTKKIVEVVKGVDVKIKGPLPLPTKKEVITIIRSPHVDKASREQFEKNRHKRLMILVDVNQGAIDSLKRIKIPVGVTLRFSK

Entity 14 Entity 14 polymer

Description description	30S ribosomal protein S11
Molecular weight formula_weight	12709.9 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	J

MAKKKKINVSSGIIHVSCSPNNTIVSASDPGGNVLCWASSGTMGFKGSRKKTPYSAGIAADKVAKTVKEMGMATVKLFVKGTGRGKDTAIRSFANAGLSITEINEKTPIPHNGCKPPKRPR

Entity 15 Entity 15 polymer

Description description	30S ribosomal protein S12
Molecular weight formula_weight	15666.6 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	K

MATIAQLIRKPRKKKKVKSKSPALHYNLNLLNKKVTNVYSPLKRGVCTRVGTMTPKKPNSALRKYAKVRLTNGFEVLTYIPGEGHNLQEHSVTLLRGGRVKDLPGVRYHIVRGTLDTVGVEKRRQQRSAYGAKKPKAKS

Entity 16 Entity 16 polymer

Description description	30S ribosomal protein S13
Molecular weight formula_weight	14209.6 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	L

MARILGIDIPNQKRIEIALTYIFGIGLSRSQAILKQANINPDKRVKDLTEEEFVAIRNVASAYKIEGDLRREIALNIKHLSEIGAWRGLRHRKNLPVRGQRTRTNARTRKGPRKTVANKKIESK

Entity 17 Entity 17 polymer

Description description	30S ribosomal protein S14 type Z
Molecular weight formula_weight	6901.4 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	M

MAKKSLKVKQTRIPKFAVRAYTRCQRCGRARAVLSHFGVCRLCFRELAYAGAIPGVKKASW

Entity 18 Entity 18 polymer

Description description	30S ribosomal protein S15
Molecular weight formula_weight	9921.7 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	N

MQIDKNGIIKSAQLHDKDVGSIQVQVSLLTSQIKQLTDHLLANKKDFISKRGLYAKVSKRKRLLKYLKHNDLEAYRNLVKTLNLRG

Entity 19 Entity 19 polymer

Description description	30S ribosomal protein S16
Molecular weight formula_weight	10806.9 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	O

MVKIRLMRMGRVHYPTYRIVAVDSRVKRDGKYIALIGHLNPALKENKCKIDEAVALEWLNKGAKPTDTVRSLFSQTGLWKKFVESKKKPVAKSK

Entity 20 Entity 20 polymer

Description description	30S ribosomal protein S17
Molecular weight formula_weight	9859.6 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	P

MKRNQRKVLIGIVKSTKNAKTATVQVESRFKHPLYHKSVVRHKKYQAHNEGEVLAKDGDKVQIVETRPLSATKRFRIAKIIERAK

Entity 21 Entity 21 polymer

Description description	30S ribosomal protein S18
Molecular weight formula_weight	12411.5 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	Q

MMNNEHDNFQKEVETTTETTFNREEGKRMVRPLFKRSKKYCRFCAIGQLRIDLIDDLEALKRFLSPYAKINPRRITGNCQMHQRHVAKALKRARYLALVPFVKD

Entity 22 Entity 22 polymer

Description description	30S ribosomal protein S19
Molecular weight formula_weight	10057.6 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	R

MSRSAKKGAFVDAHLLKKVIDMNKQEKKRPIKTWSRRSTIFPEFVGNTFAVHNGKTFINVYVTDDMVGHKLGEFSPTRNFKQHTANR

Entity 23 Entity 23 polymer

Description description	30S ribosomal protein S20
Molecular weight formula_weight	9993.6 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	S

MANIKSNEKRLRQNIKRNLNNKGQKTKLKTNVKNFHKEINLDNLGNVYSQADRLARKGIISTNRARRLKSRNVAVLNKTQVTAVEGK

Entity 24 Entity 24 polymer

Description description	30S ribosomal protein S21
Molecular weight formula_weight	7539.2 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	T

MPKIEVKNDDLELALKKFKRVSLEIRRLAQRHEYHLRKGMRLREKRKIAQKKRRKFRNMV

Entity 25 Entity 25 polymer

Description description	mRNA
Molecular weight formula_weight	6698.0 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polyribonucleotide
Chain IDs strand_id	Y

CUGCUGAUAAGGUCUUCAAAA

Entity 26 Entity 26 polymer

Description description	50S ribosomal protein L31
Molecular weight formula_weight	10980.7 kDa
Source method src_method	nat
Copy count entity_count	1

Polymer Polymer

Polymer type type	polypeptide(L)
Chain IDs strand_id	x

MKKDFHFPSQSVSFKCASCSNSFTIESTLKQKEITIDICGKCHPFYIGELTKQTVHGRAEKLSGKFNAGKAFLENKTPKKAKGKTEEYTKHRSLNEL

Entity 27 Entity 27 non-polymer

Description description	SPERMIDINE
Molecular weight formula_weight	145.2 kDa
Source method src_method	syn
Copy count entity_count	2

Entity 28 Entity 28 non-polymer

Description description	1,4-DIAMINOBUTANE
Molecular weight formula_weight	88.2 kDa
Source method src_method	syn
Copy count entity_count	2

Entity 29 Entity 29 non-polymer

Description description	PENTANE-1,5-DIAMINE
Molecular weight formula_weight	102.2 kDa
Source method src_method	syn
Copy count entity_count	1

Entity 30 Entity 30 non-polymer

Description description	MAGNESIUM ION
Molecular weight formula_weight	24.3 kDa
Source method src_method	syn
Copy count entity_count	103

Entity 31 Entity 31 non-polymer

Description description	ZINC ION
Molecular weight formula_weight	65.4 kDa
Source method src_method	syn
Copy count entity_count	2

Entity 32 Entity 32 water

Description description	water
Molecular weight formula_weight	18.0 kDa
Source method src_method	nat
Copy count entity_count	2

▶

Unit-cell length a length_a	1.000 Å
Unit-cell length b length_b	1.000 Å
Unit-cell length c length_c	1.000 Å
Unit-cell angle α angle_alpha	90.00 °
Unit-cell angle β angle_beta	90.00 °
Unit-cell angle γ angle_gamma	90.00 °
Molecules per unit cell Z z_pdb	—

Space group space_group	P 1
Space-group number int_tables_number	1
Crystal system crystal_system	—

Resolution resolution	3.20 Å
Resolution测定Method resolution_method	—
颗粒数 num_particles	30774

Mycoplasma pneumoniae small ribosomal subunit in chloramphenicol-treated cells

1. Protein Identity and Related Structures Protein Identity & Related Structures

30S ribosomal protein S2

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

30S ribosomal protein S3

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

30S ribosomal protein S4

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

30S ribosomal protein S5

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

30S ribosomal protein S6

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

30S ribosomal protein S7

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

30S ribosomal protein S8

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

30S ribosomal protein S9

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

30S ribosomal protein S10

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

30S ribosomal protein S11

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer