8ptw

Chaetomium thermophilum Rix1-complex

Method: ELECTRON MICROSCOPY
▼

1. Protein Identity and Related Structures Protein Identity & Related Structures

Pre-rRNA-processing protein IPI3

OrganismNot specified

UniProt G0S1T5

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 4 Pre-rRNA-processing protein RIX1 × 2 (G0S5R0) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name G0S1T5_CHATD
Isoform —
PDB entities 1
Chains and sequence ranges Author chain CT; PDBConstruct 1–437; UniProt 1–437 Author chain CU; PDBConstruct 1–437; UniProt 1–437

Pre-rRNA-processing protein RIX1

OrganismNot specified

UniProt G0S5R0

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 4 Pre-rRNA-processing protein IPI3 × 2 (G0S1T5) Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name G0S5R0_CHATD
Isoform —
PDB entities 2
Chains and sequence ranges Author chain CV; PDBConstruct 1–781; UniProt 1–781 Author chain CW; PDBConstruct 1–781; UniProt 1–781

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

▼

2. Structure Basics 2. Structure Basics

Entry ID entry_id8ptw
Deposition date deposition_date2023-07-15
Structure title titleChaetomium thermophilum Rix1-complex
Keywords keywordsbiogenesis, pre-60S, 5S RNP, RIBOSOME; RIBOSOME
Experimental Method methodELECTRON MICROSCOPY
▼

3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

8ptw__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

8ptw__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

8ptw__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)38.84 Å
Rg (electron density)37.63 Å
Total Rg38.15 Å
Atom count14242
Residues1878
Excluded volume255150 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 8ptw__assembly_1__model_1 tetrameric (4) Success 4.1.3-1-20251215 (887e7ef) View Download
▶

4. Crystallography and Experiment 4. Crystallography & Experiment

▶

5. Entities and Polymers Entities & Polymers (2)

▶

7. Citations (1)