9hlz

Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Small ribosomal subunit protein mS38

OrganismNot specified

UniProt P32344

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 76 RNA 3 Small ribosomal subunit protein mS41 × 1 (P38783) Small ribosomal subunit protein mS42 × 1 (P47141) Small ribosomal subunit protein mS43 × 1 Small ribosomal subunit protein mS44 × 1 Small ribosomal subunit protein mS45 × 1 Small ribosomal subunit protein mS46 × 1 Small ribosomal subunit protein mS47 × 1 Small ribosomal subunit protein bS1m × 1 Small ribosomal subunit protein uS2m × 1 Small ribosomal subunit protein uS3m × 1 Small ribosomal subunit protein uS4m × 1 Small ribosomal subunit protein uS5m × 1 Small ribosomal subunit protein bS6m × 1 Small ribosomal subunit protein uS7m × 1 Small ribosomal subunit protein uS8m × 1 Small ribosomal subunit protein uS9m × 1 Small ribosomal subunit protein uS10m × 1 Small ribosomal subunit protein uS11m × 1 Small ribosomal subunit protein uS12m × 1 Small ribosomal subunit protein uS13m × 1 Small ribosomal subunit protein uS14m × 1 Small ribosomal subunit protein uS15m × 1 Small ribosomal subunit protein bS16m × 1 Small ribosomal subunit protein uS17m × 1 Small ribosomal subunit protein bS18m × 1 Small ribosomal subunit protein uS19m × 1 Small ribosomal subunit protein bS21m × 1 Small ribosomal subunit protein mS23 × 1 Small ribosomal subunit protein mS29 × 1 Small ribosomal subunit protein mS33 × 1 Small ribosomal subunit protein mS35 × 1 Small ribosomal subunit protein mS37 × 1 ATPase expression protein 1 × 1 ATPase expression protein 2 × 1 ATPase synthesis protein 25, mitochondrial × 1 E/E-site formyl-methionine tRNA × 1 Large ribosomal subunit protein bL36m × 1 (O14464) Large ribosomal subunit protein mL38 × 1 (Q06678) Large ribosomal subunit protein mL40 × 1 (P36527) Large ribosomal subunit protein mL41 × 1 Large ribosomal subunit protein mL43 × 1 Large ribosomal subunit protein mL44 × 1 Large ribosomal subunit protein mL46 × 1 Large ribosomal subunit protein mL49 × 1 Large ribosomal subunit protein mL50 × 1 Large ribosomal subunit protein mL57 × 1 21S mitochondrial rRNA × 1 Large ribosomal subunit protein uL2m × 1 Large ribosomal subunit protein uL3m × 1 Large ribosomal subunit protein uL4m × 1 Large ribosomal subunit protein uL5m × 1 Large ribosomal subunit protein uL6m × 1 Large ribosomal subunit protein bL9m × 1 Large ribosomal subunit protein uL13m × 1 Large ribosomal subunit protein uL14m × 1 Large ribosomal subunit protein uL15m × 1 Large ribosomal subunit protein uL16m × 1 Large ribosomal subunit protein bL17m × 1 Large ribosomal subunit protein bL19m × 1 Large ribosomal subunit protein bL21m × 1 Large ribosomal subunit protein uL22m × 1 Large ribosomal subunit protein uL23m × 1 Large ribosomal subunit protein uL24m × 1 Large ribosomal subunit protein bL27m × 1 Large ribosomal subunit protein bL28m × 1 Large ribosomal subunit protein uL29m × 1 Large ribosomal subunit protein uL30m × 1 Small ribosomal subunit protein mS26 × 1 Large ribosomal subunit protein bL31m × 1 Large ribosomal subunit protein bL32m × 1 Large ribosomal subunit protein bL33m × 1 Large ribosomal subunit protein bL34m × 1 Large ribosomal subunit protein bL35m × 1 Large ribosomal subunit protein mL58 × 1 Large ribosomal subunit protein mL59 × 1 Large ribosomal subunit protein mL60 × 1 Large ribosomal subunit protein mL67 × 1 15S mitochondrial rRNA × 1 MAGNESIUM ION × 299 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name COX24_YEAST
Isoform —
PDB entities 1
Chains and sequence ranges Author chain 1; PDBConstruct 1–111; UniProt 1–111

Small ribosomal subunit protein mS41

OrganismNot specified

UniProt P38783

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 76 RNA 3 Small ribosomal subunit protein mS38 × 1 (P32344) Small ribosomal subunit protein mS42 × 1 (P47141) Small ribosomal subunit protein mS43 × 1 Small ribosomal subunit protein mS44 × 1 Small ribosomal subunit protein mS45 × 1 Small ribosomal subunit protein mS46 × 1 Small ribosomal subunit protein mS47 × 1 Small ribosomal subunit protein bS1m × 1 Small ribosomal subunit protein uS2m × 1 Small ribosomal subunit protein uS3m × 1 Small ribosomal subunit protein uS4m × 1 Small ribosomal subunit protein uS5m × 1 Small ribosomal subunit protein bS6m × 1 Small ribosomal subunit protein uS7m × 1 Small ribosomal subunit protein uS8m × 1 Small ribosomal subunit protein uS9m × 1 Small ribosomal subunit protein uS10m × 1 Small ribosomal subunit protein uS11m × 1 Small ribosomal subunit protein uS12m × 1 Small ribosomal subunit protein uS13m × 1 Small ribosomal subunit protein uS14m × 1 Small ribosomal subunit protein uS15m × 1 Small ribosomal subunit protein bS16m × 1 Small ribosomal subunit protein uS17m × 1 Small ribosomal subunit protein bS18m × 1 Small ribosomal subunit protein uS19m × 1 Small ribosomal subunit protein bS21m × 1 Small ribosomal subunit protein mS23 × 1 Small ribosomal subunit protein mS29 × 1 Small ribosomal subunit protein mS33 × 1 Small ribosomal subunit protein mS35 × 1 Small ribosomal subunit protein mS37 × 1 ATPase expression protein 1 × 1 ATPase expression protein 2 × 1 ATPase synthesis protein 25, mitochondrial × 1 E/E-site formyl-methionine tRNA × 1 Large ribosomal subunit protein bL36m × 1 (O14464) Large ribosomal subunit protein mL38 × 1 (Q06678) Large ribosomal subunit protein mL40 × 1 (P36527) Large ribosomal subunit protein mL41 × 1 Large ribosomal subunit protein mL43 × 1 Large ribosomal subunit protein mL44 × 1 Large ribosomal subunit protein mL46 × 1 Large ribosomal subunit protein mL49 × 1 Large ribosomal subunit protein mL50 × 1 Large ribosomal subunit protein mL57 × 1 21S mitochondrial rRNA × 1 Large ribosomal subunit protein uL2m × 1 Large ribosomal subunit protein uL3m × 1 Large ribosomal subunit protein uL4m × 1 Large ribosomal subunit protein uL5m × 1 Large ribosomal subunit protein uL6m × 1 Large ribosomal subunit protein bL9m × 1 Large ribosomal subunit protein uL13m × 1 Large ribosomal subunit protein uL14m × 1 Large ribosomal subunit protein uL15m × 1 Large ribosomal subunit protein uL16m × 1 Large ribosomal subunit protein bL17m × 1 Large ribosomal subunit protein bL19m × 1 Large ribosomal subunit protein bL21m × 1 Large ribosomal subunit protein uL22m × 1 Large ribosomal subunit protein uL23m × 1 Large ribosomal subunit protein uL24m × 1 Large ribosomal subunit protein bL27m × 1 Large ribosomal subunit protein bL28m × 1 Large ribosomal subunit protein uL29m × 1 Large ribosomal subunit protein uL30m × 1 Small ribosomal subunit protein mS26 × 1 Large ribosomal subunit protein bL31m × 1 Large ribosomal subunit protein bL32m × 1 Large ribosomal subunit protein bL33m × 1 Large ribosomal subunit protein bL34m × 1 Large ribosomal subunit protein bL35m × 1 Large ribosomal subunit protein mL58 × 1 Large ribosomal subunit protein mL59 × 1 Large ribosomal subunit protein mL60 × 1 Large ribosomal subunit protein mL67 × 1 15S mitochondrial rRNA × 1 MAGNESIUM ION × 299 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name FYV4_YEAST
Isoform —
PDB entities 2
Chains and sequence ranges Author chain 2; PDBConstruct 1–130; UniProt 1–130

Small ribosomal subunit protein mS42

OrganismNot specified

UniProt P47141

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 76 RNA 3 Small ribosomal subunit protein mS38 × 1 (P32344) Small ribosomal subunit protein mS41 × 1 (P38783) Small ribosomal subunit protein mS43 × 1 Small ribosomal subunit protein mS44 × 1 Small ribosomal subunit protein mS45 × 1 Small ribosomal subunit protein mS46 × 1 Small ribosomal subunit protein mS47 × 1 Small ribosomal subunit protein bS1m × 1 Small ribosomal subunit protein uS2m × 1 Small ribosomal subunit protein uS3m × 1 Small ribosomal subunit protein uS4m × 1 Small ribosomal subunit protein uS5m × 1 Small ribosomal subunit protein bS6m × 1 Small ribosomal subunit protein uS7m × 1 Small ribosomal subunit protein uS8m × 1 Small ribosomal subunit protein uS9m × 1 Small ribosomal subunit protein uS10m × 1 Small ribosomal subunit protein uS11m × 1 Small ribosomal subunit protein uS12m × 1 Small ribosomal subunit protein uS13m × 1 Small ribosomal subunit protein uS14m × 1 Small ribosomal subunit protein uS15m × 1 Small ribosomal subunit protein bS16m × 1 Small ribosomal subunit protein uS17m × 1 Small ribosomal subunit protein bS18m × 1 Small ribosomal subunit protein uS19m × 1 Small ribosomal subunit protein bS21m × 1 Small ribosomal subunit protein mS23 × 1 Small ribosomal subunit protein mS29 × 1 Small ribosomal subunit protein mS33 × 1 Small ribosomal subunit protein mS35 × 1 Small ribosomal subunit protein mS37 × 1 ATPase expression protein 1 × 1 ATPase expression protein 2 × 1 ATPase synthesis protein 25, mitochondrial × 1 E/E-site formyl-methionine tRNA × 1 Large ribosomal subunit protein bL36m × 1 (O14464) Large ribosomal subunit protein mL38 × 1 (Q06678) Large ribosomal subunit protein mL40 × 1 (P36527) Large ribosomal subunit protein mL41 × 1 Large ribosomal subunit protein mL43 × 1 Large ribosomal subunit protein mL44 × 1 Large ribosomal subunit protein mL46 × 1 Large ribosomal subunit protein mL49 × 1 Large ribosomal subunit protein mL50 × 1 Large ribosomal subunit protein mL57 × 1 21S mitochondrial rRNA × 1 Large ribosomal subunit protein uL2m × 1 Large ribosomal subunit protein uL3m × 1 Large ribosomal subunit protein uL4m × 1 Large ribosomal subunit protein uL5m × 1 Large ribosomal subunit protein uL6m × 1 Large ribosomal subunit protein bL9m × 1 Large ribosomal subunit protein uL13m × 1 Large ribosomal subunit protein uL14m × 1 Large ribosomal subunit protein uL15m × 1 Large ribosomal subunit protein uL16m × 1 Large ribosomal subunit protein bL17m × 1 Large ribosomal subunit protein bL19m × 1 Large ribosomal subunit protein bL21m × 1 Large ribosomal subunit protein uL22m × 1 Large ribosomal subunit protein uL23m × 1 Large ribosomal subunit protein uL24m × 1 Large ribosomal subunit protein bL27m × 1 Large ribosomal subunit protein bL28m × 1 Large ribosomal subunit protein uL29m × 1 Large ribosomal subunit protein uL30m × 1 Small ribosomal subunit protein mS26 × 1 Large ribosomal subunit protein bL31m × 1 Large ribosomal subunit protein bL32m × 1 Large ribosomal subunit protein bL33m × 1 Large ribosomal subunit protein bL34m × 1 Large ribosomal subunit protein bL35m × 1 Large ribosomal subunit protein mL58 × 1 Large ribosomal subunit protein mL59 × 1 Large ribosomal subunit protein mL60 × 1 Large ribosomal subunit protein mL67 × 1 15S mitochondrial rRNA × 1 MAGNESIUM ION × 299 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RT26_YEAST
Isoform —
PDB entities 3
Chains and sequence ranges Author chain 3; PDBConstruct 1–266; UniProt 1–266

Large ribosomal subunit protein bL36m

OrganismNot specified

UniProt O14464

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 76 RNA 3 Small ribosomal subunit protein mS38 × 1 (P32344) Small ribosomal subunit protein mS41 × 1 (P38783) Small ribosomal subunit protein mS42 × 1 (P47141) Small ribosomal subunit protein mS43 × 1 Small ribosomal subunit protein mS44 × 1 Small ribosomal subunit protein mS45 × 1 Small ribosomal subunit protein mS46 × 1 Small ribosomal subunit protein mS47 × 1 Small ribosomal subunit protein bS1m × 1 Small ribosomal subunit protein uS2m × 1 Small ribosomal subunit protein uS3m × 1 Small ribosomal subunit protein uS4m × 1 Small ribosomal subunit protein uS5m × 1 Small ribosomal subunit protein bS6m × 1 Small ribosomal subunit protein uS7m × 1 Small ribosomal subunit protein uS8m × 1 Small ribosomal subunit protein uS9m × 1 Small ribosomal subunit protein uS10m × 1 Small ribosomal subunit protein uS11m × 1 Small ribosomal subunit protein uS12m × 1 Small ribosomal subunit protein uS13m × 1 Small ribosomal subunit protein uS14m × 1 Small ribosomal subunit protein uS15m × 1 Small ribosomal subunit protein bS16m × 1 Small ribosomal subunit protein uS17m × 1 Small ribosomal subunit protein bS18m × 1 Small ribosomal subunit protein uS19m × 1 Small ribosomal subunit protein bS21m × 1 Small ribosomal subunit protein mS23 × 1 Small ribosomal subunit protein mS29 × 1 Small ribosomal subunit protein mS33 × 1 Small ribosomal subunit protein mS35 × 1 Small ribosomal subunit protein mS37 × 1 ATPase expression protein 1 × 1 ATPase expression protein 2 × 1 ATPase synthesis protein 25, mitochondrial × 1 E/E-site formyl-methionine tRNA × 1 Large ribosomal subunit protein mL38 × 1 (Q06678) Large ribosomal subunit protein mL40 × 1 (P36527) Large ribosomal subunit protein mL41 × 1 Large ribosomal subunit protein mL43 × 1 Large ribosomal subunit protein mL44 × 1 Large ribosomal subunit protein mL46 × 1 Large ribosomal subunit protein mL49 × 1 Large ribosomal subunit protein mL50 × 1 Large ribosomal subunit protein mL57 × 1 21S mitochondrial rRNA × 1 Large ribosomal subunit protein uL2m × 1 Large ribosomal subunit protein uL3m × 1 Large ribosomal subunit protein uL4m × 1 Large ribosomal subunit protein uL5m × 1 Large ribosomal subunit protein uL6m × 1 Large ribosomal subunit protein bL9m × 1 Large ribosomal subunit protein uL13m × 1 Large ribosomal subunit protein uL14m × 1 Large ribosomal subunit protein uL15m × 1 Large ribosomal subunit protein uL16m × 1 Large ribosomal subunit protein bL17m × 1 Large ribosomal subunit protein bL19m × 1 Large ribosomal subunit protein bL21m × 1 Large ribosomal subunit protein uL22m × 1 Large ribosomal subunit protein uL23m × 1 Large ribosomal subunit protein uL24m × 1 Large ribosomal subunit protein bL27m × 1 Large ribosomal subunit protein bL28m × 1 Large ribosomal subunit protein uL29m × 1 Large ribosomal subunit protein uL30m × 1 Small ribosomal subunit protein mS26 × 1 Large ribosomal subunit protein bL31m × 1 Large ribosomal subunit protein bL32m × 1 Large ribosomal subunit protein bL33m × 1 Large ribosomal subunit protein bL34m × 1 Large ribosomal subunit protein bL35m × 1 Large ribosomal subunit protein mL58 × 1 Large ribosomal subunit protein mL59 × 1 Large ribosomal subunit protein mL60 × 1 Large ribosomal subunit protein mL67 × 1 15S mitochondrial rRNA × 1 MAGNESIUM ION × 299 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RTC6_YEAST
Isoform —
PDB entities 38
Chains and sequence ranges Author chain 00; PDBConstruct 1–93; UniProt 1–93

Large ribosomal subunit protein mL38

OrganismNot specified

UniProt Q06678

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 76 RNA 3 Small ribosomal subunit protein mS38 × 1 (P32344) Small ribosomal subunit protein mS41 × 1 (P38783) Small ribosomal subunit protein mS42 × 1 (P47141) Small ribosomal subunit protein mS43 × 1 Small ribosomal subunit protein mS44 × 1 Small ribosomal subunit protein mS45 × 1 Small ribosomal subunit protein mS46 × 1 Small ribosomal subunit protein mS47 × 1 Small ribosomal subunit protein bS1m × 1 Small ribosomal subunit protein uS2m × 1 Small ribosomal subunit protein uS3m × 1 Small ribosomal subunit protein uS4m × 1 Small ribosomal subunit protein uS5m × 1 Small ribosomal subunit protein bS6m × 1 Small ribosomal subunit protein uS7m × 1 Small ribosomal subunit protein uS8m × 1 Small ribosomal subunit protein uS9m × 1 Small ribosomal subunit protein uS10m × 1 Small ribosomal subunit protein uS11m × 1 Small ribosomal subunit protein uS12m × 1 Small ribosomal subunit protein uS13m × 1 Small ribosomal subunit protein uS14m × 1 Small ribosomal subunit protein uS15m × 1 Small ribosomal subunit protein bS16m × 1 Small ribosomal subunit protein uS17m × 1 Small ribosomal subunit protein bS18m × 1 Small ribosomal subunit protein uS19m × 1 Small ribosomal subunit protein bS21m × 1 Small ribosomal subunit protein mS23 × 1 Small ribosomal subunit protein mS29 × 1 Small ribosomal subunit protein mS33 × 1 Small ribosomal subunit protein mS35 × 1 Small ribosomal subunit protein mS37 × 1 ATPase expression protein 1 × 1 ATPase expression protein 2 × 1 ATPase synthesis protein 25, mitochondrial × 1 E/E-site formyl-methionine tRNA × 1 Large ribosomal subunit protein bL36m × 1 (O14464) Large ribosomal subunit protein mL40 × 1 (P36527) Large ribosomal subunit protein mL41 × 1 Large ribosomal subunit protein mL43 × 1 Large ribosomal subunit protein mL44 × 1 Large ribosomal subunit protein mL46 × 1 Large ribosomal subunit protein mL49 × 1 Large ribosomal subunit protein mL50 × 1 Large ribosomal subunit protein mL57 × 1 21S mitochondrial rRNA × 1 Large ribosomal subunit protein uL2m × 1 Large ribosomal subunit protein uL3m × 1 Large ribosomal subunit protein uL4m × 1 Large ribosomal subunit protein uL5m × 1 Large ribosomal subunit protein uL6m × 1 Large ribosomal subunit protein bL9m × 1 Large ribosomal subunit protein uL13m × 1 Large ribosomal subunit protein uL14m × 1 Large ribosomal subunit protein uL15m × 1 Large ribosomal subunit protein uL16m × 1 Large ribosomal subunit protein bL17m × 1 Large ribosomal subunit protein bL19m × 1 Large ribosomal subunit protein bL21m × 1 Large ribosomal subunit protein uL22m × 1 Large ribosomal subunit protein uL23m × 1 Large ribosomal subunit protein uL24m × 1 Large ribosomal subunit protein bL27m × 1 Large ribosomal subunit protein bL28m × 1 Large ribosomal subunit protein uL29m × 1 Large ribosomal subunit protein uL30m × 1 Small ribosomal subunit protein mS26 × 1 Large ribosomal subunit protein bL31m × 1 Large ribosomal subunit protein bL32m × 1 Large ribosomal subunit protein bL33m × 1 Large ribosomal subunit protein bL34m × 1 Large ribosomal subunit protein bL35m × 1 Large ribosomal subunit protein mL58 × 1 Large ribosomal subunit protein mL59 × 1 Large ribosomal subunit protein mL60 × 1 Large ribosomal subunit protein mL67 × 1 15S mitochondrial rRNA × 1 MAGNESIUM ION × 299 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RM35_YEAST
Isoform —
PDB entities 39
Chains and sequence ranges Author chain 11; PDBConstruct 1–367; UniProt 1–367

Large ribosomal subunit protein mL40

OrganismNot specified

UniProt P36527

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 76 RNA 3 Small ribosomal subunit protein mS38 × 1 (P32344) Small ribosomal subunit protein mS41 × 1 (P38783) Small ribosomal subunit protein mS42 × 1 (P47141) Small ribosomal subunit protein mS43 × 1 Small ribosomal subunit protein mS44 × 1 Small ribosomal subunit protein mS45 × 1 Small ribosomal subunit protein mS46 × 1 Small ribosomal subunit protein mS47 × 1 Small ribosomal subunit protein bS1m × 1 Small ribosomal subunit protein uS2m × 1 Small ribosomal subunit protein uS3m × 1 Small ribosomal subunit protein uS4m × 1 Small ribosomal subunit protein uS5m × 1 Small ribosomal subunit protein bS6m × 1 Small ribosomal subunit protein uS7m × 1 Small ribosomal subunit protein uS8m × 1 Small ribosomal subunit protein uS9m × 1 Small ribosomal subunit protein uS10m × 1 Small ribosomal subunit protein uS11m × 1 Small ribosomal subunit protein uS12m × 1 Small ribosomal subunit protein uS13m × 1 Small ribosomal subunit protein uS14m × 1 Small ribosomal subunit protein uS15m × 1 Small ribosomal subunit protein bS16m × 1 Small ribosomal subunit protein uS17m × 1 Small ribosomal subunit protein bS18m × 1 Small ribosomal subunit protein uS19m × 1 Small ribosomal subunit protein bS21m × 1 Small ribosomal subunit protein mS23 × 1 Small ribosomal subunit protein mS29 × 1 Small ribosomal subunit protein mS33 × 1 Small ribosomal subunit protein mS35 × 1 Small ribosomal subunit protein mS37 × 1 ATPase expression protein 1 × 1 ATPase expression protein 2 × 1 ATPase synthesis protein 25, mitochondrial × 1 E/E-site formyl-methionine tRNA × 1 Large ribosomal subunit protein bL36m × 1 (O14464) Large ribosomal subunit protein mL38 × 1 (Q06678) Large ribosomal subunit protein mL41 × 1 Large ribosomal subunit protein mL43 × 1 Large ribosomal subunit protein mL44 × 1 Large ribosomal subunit protein mL46 × 1 Large ribosomal subunit protein mL49 × 1 Large ribosomal subunit protein mL50 × 1 Large ribosomal subunit protein mL57 × 1 21S mitochondrial rRNA × 1 Large ribosomal subunit protein uL2m × 1 Large ribosomal subunit protein uL3m × 1 Large ribosomal subunit protein uL4m × 1 Large ribosomal subunit protein uL5m × 1 Large ribosomal subunit protein uL6m × 1 Large ribosomal subunit protein bL9m × 1 Large ribosomal subunit protein uL13m × 1 Large ribosomal subunit protein uL14m × 1 Large ribosomal subunit protein uL15m × 1 Large ribosomal subunit protein uL16m × 1 Large ribosomal subunit protein bL17m × 1 Large ribosomal subunit protein bL19m × 1 Large ribosomal subunit protein bL21m × 1 Large ribosomal subunit protein uL22m × 1 Large ribosomal subunit protein uL23m × 1 Large ribosomal subunit protein uL24m × 1 Large ribosomal subunit protein bL27m × 1 Large ribosomal subunit protein bL28m × 1 Large ribosomal subunit protein uL29m × 1 Large ribosomal subunit protein uL30m × 1 Small ribosomal subunit protein mS26 × 1 Large ribosomal subunit protein bL31m × 1 Large ribosomal subunit protein bL32m × 1 Large ribosomal subunit protein bL33m × 1 Large ribosomal subunit protein bL34m × 1 Large ribosomal subunit protein bL35m × 1 Large ribosomal subunit protein mL58 × 1 Large ribosomal subunit protein mL59 × 1 Large ribosomal subunit protein mL60 × 1 Large ribosomal subunit protein mL67 × 1 15S mitochondrial rRNA × 1 MAGNESIUM ION × 299 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RM28_YEAST
Isoform —
PDB entities 40
Chains and sequence ranges Author chain 22; PDBConstruct 1–147; UniProt 1–147

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id9hlz
Deposition date deposition_date2024-12-06
Structure title titleTranslational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome
Keywords keywordsMitoribosome, translation, RIBOSOME; RIBOSOME
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

9hlz__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

9hlz__assembly_1__model_1 | I(q)

10-2 10-1 107 108 109 1010 1011 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

9hlz__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)99.10 Å
Rg (electron density)103.40 Å
Total Rg102.80 Å
Atom count218112
Residues19982
Excluded volume3567300 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 9hlz__assembly_1__model_1 79-meric (79) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (81)

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7. Citations (1)