9mj2
Flag-tag Lassa virus spike complex at pH 6.0
Method: ELECTRON MICROSCOPY
SAXS 散射曲线 SAXS Profile
暂无 SAXS 图
P(r) 距离分布 P(r) Distribution
暂无 P(r) 图
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1. 结构基本信息 1. Structure Basics
| 条目编号 entry_id | 9mj2 |
| 沉积日期 deposition_date | 2024-12-13 |
| 结构标题 title | Flag-tag Lassa virus spike complex at pH 6.0 |
| 关键词 keywords | Spike complex, VIRAL PROTEIN; VIRAL PROTEIN |
| 实验方法 method | ELECTRON MICROSCOPY |
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2. SAXS 参数 (CRYSOL 理论计算) 2. SAXS Parameters (CRYSOL)
该条目暂无 SAXS 数据。
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3. P(r) 距离分布 (GNOM 反演) 3. P(r) Analysis (GNOM)
该条目暂无 P(r) 分析数据。
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4. 晶体学与实验 4. Crystallography & Experiment
晶胞参数 Unit Cell
| 晶胞边长 a length_a | 1.000 Å |
| 晶胞边长 b length_b | 1.000 Å |
| 晶胞边长 c length_c | 1.000 Å |
| 晶胞夹角 α angle_alpha | 90.00 ° |
| 晶胞夹角 β angle_beta | 90.00 ° |
| 晶胞夹角 γ angle_gamma | 90.00 ° |
| 晶胞分子数 Z z_pdb | — |
对称性 Symmetry
| 空间群 space_group | P 1 |
| 空间群编号 int_tables_number | 1 |
| 晶系 crystal_system | triclinic |
冷冻电镜 EM 3D
| 分辨率 resolution | 2.58 Å |
| 分辨率测定方法 resolution_method | — |
| 颗粒数 num_particles | 49874 |
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5. 实体与聚合体信息 (10)
Entity 1 polymer
| 描述 description | Pre-glycoprotein polyprotein GP complex |
| 分子量 formula_weight | 22793.8 kDa |
| 来源方法 src_method | man |
| 拷贝数 entity_count | 3 |
聚合体 Polymer
| 聚合体类型 type | polypeptide(L) |
| 链编号 strand_id | A,B,C |
| 原子数 atom_count | 9522 |
TSLYKGVYELQTLELNMETLNMTMPLSCTKNNSHHYIMVGNETGLELTLTNTSIINHKFCNLSDAHKKNLYDHALMSIISTFHLSIPNFNQYEAMSCDFNGGKISVQYNLSHSYAGDAANHCGTVANGVLQTFMRMAWGGSYIALDSGRGNWDCIMTSYQYLIIQNTTWEDHCQFSRPSPIGYLGLLSQRTRDIYISRRLL
来源 Source
| 来源生物 organism | Lassa virus Josiah |
| NCBI 分类编号 ncbi_taxonomy_id | 11622 |
| 宿主生物 host_organism | Homo sapiens |
Entity 2 polymer
| 描述 description | Glycoprotein G2 |
| 分子量 formula_weight | 26828.1 kDa |
| 来源方法 src_method | man |
| 拷贝数 entity_count | 3 |
聚合体 Polymer
| 聚合体类型 type | polypeptide(L) |
| 链编号 strand_id | a,b,c |
GTFTWTLSDSEGKDTPGGYCLTRWMLIEAELKCFGNTAVAKCNEKHDEEFCDMLRLFDFNKQAIQRLKAEAQMSIQLINKAVNALINDQLIMKNHLRDIMGIPYCNYSKYWYLNHTTTGRTSLPKCWLVSNGSYLNETHFSDDIEQQADNMITEMLQKEYMERQGKTPLGLVDLFVFSTSFYLISIFLHLVKIPTHRHIVGKSCPKPHRLNHMGICSCGLYKQPGVPVKWKR
来源 Source
| 来源生物 organism | Lassa virus Josiah |
| NCBI 分类编号 ncbi_taxonomy_id | 11622 |
| 宿主生物 host_organism | Homo sapiens |
Entity 3 branched
| 描述 description | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose |
| 分子量 formula_weight | 586.5 kDa |
| 来源方法 src_method | man |
| 拷贝数 entity_count | 6 |
Entity 4 branched
| 描述 description | ;alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose ; |
| 分子量 formula_weight | 894.8 kDa |
| 来源方法 src_method | man |
| 拷贝数 entity_count | 3 |
Entity 5 branched
| 描述 description | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose |
| 分子量 formula_weight | 570.5 kDa |
| 来源方法 src_method | man |
| 拷贝数 entity_count | 3 |
Entity 6 branched
| 描述 description | alpha-D-xylopyranose-(1-3)-beta-D-glucopyranuronic acid-(1-3)-alpha-D-xylopyranose |
| 分子量 formula_weight | 458.4 kDa |
| 来源方法 src_method | man |
| 拷贝数 entity_count | 3 |
Entity 7 branched
| 描述 description | ;alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose ; |
| 分子量 formula_weight | 748.7 kDa |
| 来源方法 src_method | man |
| 拷贝数 entity_count | 3 |
Entity 8 non-polymer
| 描述 description | 2-acetamido-2-deoxy-beta-D-glucopyranose |
| 分子量 formula_weight | 221.2 kDa |
| 来源方法 src_method | syn |
| 拷贝数 entity_count | 15 |
Entity 9 non-polymer
| 描述 description | UNKNOWN LIGAND |
| 分子量 formula_weight | 39.1 kDa |
| 来源方法 src_method | syn |
| 拷贝数 entity_count | 3 |
Entity 10 water
| 描述 description | water |
| 分子量 formula_weight | 18.0 kDa |
| 来源方法 src_method | nat |
| 拷贝数 entity_count | 3 |
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7. 引用文献 (1)
pH-induced conformational changes and inhibition of the Lassa virus spike complex.
Cell Host Microbe (2025)
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8. 文件与曲线 (0)
该条目暂无文件或曲线数据。