9q3c
;RNA oligonucleotide containing a 3'-deoxyapio-T ;
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9q3c |
| deposition_date | 2025-08-18 |
| title | ;RNA oligonucleotide containing a 3'-deoxyapio-T ; |
| keywords | ;oligonucleotide, 3'-deoxyapio nucleic acid, RNA ;; RNA |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 25.66 Å |
| rg_electron | 25.41 Å |
| i0 | 67261500.00 |
| molecular_weight | 35939.0 kDa |
| excluded_volume | 32126 ų |
| envelope_volume | 56982 ų |
| shell_volume | 20346 ų |
| envelope_diameter | 86.3 Å |
| shell_rg | 30.17 Å |
| envelope_rg | 24.96 Å |
| shape_rg | 25.45 Å |
| total_rg | 25.72 Å |
| total_atoms | 3426 |
| n_residues | 84 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 82.5 Å |
| rg_real | 25.70 Å |
| rg_real_error | 0.54 Å |
| i0_real | 6.7260e+07 |
| i0_real_error | 8.7410e+05 |
| rg_reciprocal | 25.69 Å |
| i0_reciprocal | 67260000.0000 |
| total_estimate | 0.7129 |
| solution_quality | REASONABLE a REASONABLE solution |
| n_peaks | 2 |
| r_peak_primary | 31.9 Å |
| skewness | 0.335 |
| kurtosis | -0.388 |
| angular_range | — – 0.3100 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 2091000.0000 |
| n_real_points | 63 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.939; Stabil: 1.000; Sysdev: 0.164; Positv: 1.000; Valcen: 0.978; Smooth: 0.977 |