9q3d
[20-7B C|A] 20 bp tensegrity triangle that propagates via blunt-end stacking with C stacking on A at the interface
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9q3d |
| deposition_date | 2025-08-18 |
| title | [20-7B C|A] 20 bp tensegrity triangle that propagates via blunt-end stacking with C stacking on A at the interface |
| keywords | tensegrity triangle, blunt, DNA; DNA |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 19.70 Å |
| rg_electron | 19.92 Å |
| i0 | 7045250.00 |
| molecular_weight | 12144.0 kDa |
| excluded_volume | 11790 ų |
| envelope_volume | 18332 ų |
| shell_volume | 9330 ų |
| envelope_diameter | 70.1 Å |
| shell_rg | 22.51 Å |
| envelope_rg | 20.04 Å |
| shape_rg | 19.86 Å |
| total_rg | 20.30 Å |
| total_atoms | 808 |
| n_residues | 40 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 71.7 Å |
| rg_real | 20.12 Å |
| rg_real_error | 0.66 Å |
| i0_real | 7.0450e+06 |
| i0_real_error | 9.2470e+04 |
| rg_reciprocal | 20.06 Å |
| i0_reciprocal | 7045000.0000 |
| total_estimate | 0.6261 |
| solution_quality | REASONABLE a REASONABLE solution |
| n_peaks | 2 |
| r_peak_primary | 15.2 Å |
| skewness | 0.614 |
| kurtosis | -0.370 |
| angular_range | — – 0.4050 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 772200.0000 |
| n_real_points | 72 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.349; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.090; Smooth: 0.000 |