9q5j
[12-5B G|A] 12 bp tensegrity triangle that propagates via blunt-end stacking with G stacking on A at the interface
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9q5j |
| deposition_date | 2025-08-20 |
| title | [12-5B G|A] 12 bp tensegrity triangle that propagates via blunt-end stacking with G stacking on A at the interface |
| keywords | dna, tensegrity triangle, stacking, blunt; DNA |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 13.57 Å |
| rg_electron | 12.98 Å |
| i0 | 2789680.00 |
| molecular_weight | 7311.0 kDa |
| excluded_volume | 7109 ų |
| envelope_volume | 9882 ų |
| shell_volume | 7213 ų |
| envelope_diameter | 42.2 Å |
| shell_rg | 17.10 Å |
| envelope_rg | 13.09 Å |
| shape_rg | 12.85 Å |
| total_rg | 13.85 Å |
| total_atoms | 486 |
| n_residues | 24 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 44.1 Å |
| rg_real | 13.58 Å |
| rg_real_error | 0.32 Å |
| i0_real | 2.7900e+06 |
| i0_real_error | 3.4430e+04 |
| rg_reciprocal | 13.58 Å |
| i0_reciprocal | 2790000.0000 |
| total_estimate | 0.9007 |
| solution_quality | EXCELLENT a EXCELLENT solution |
| n_peaks | 2 |
| r_peak_primary | 15.6 Å |
| skewness | 0.311 |
| kurtosis | -0.440 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 136900.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.930; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.941; Smooth: 0.974 |