9q5k
[23-7B C|A] 23 bp tensegrity triangle that propagates via blunt-end stacking with C stacking on A at the interface
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9q5k |
| deposition_date | 2025-08-20 |
| title | [23-7B C|A] 23 bp tensegrity triangle that propagates via blunt-end stacking with C stacking on A at the interface |
| keywords | dna, tensegrity triangle, stacking, blunt; DNA |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 39.82 Å |
| rg_electron | 39.66 Å |
| i0 | 33283600.00 |
| molecular_weight | 28071.0 kDa |
| excluded_volume | 27211 ų |
| envelope_volume | 62851 ų |
| shell_volume | 13708 ų |
| envelope_diameter | 112.3 Å |
| shell_rg | 44.99 Å |
| envelope_rg | 35.74 Å |
| shape_rg | 39.64 Å |
| total_rg | 39.97 Å |
| total_atoms | 1865 |
| n_residues | 92 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 109.9 Å |
| rg_real | 39.85 Å |
| rg_real_error | 0.86 Å |
| i0_real | 3.3280e+07 |
| i0_real_error | 4.4980e+05 |
| rg_reciprocal | 39.85 Å |
| i0_reciprocal | 33280000.0000 |
| total_estimate | 0.3887 |
| solution_quality | SUSPICIOUS a SUSPICIOUS solution |
| n_peaks | 2 |
| r_peak_primary | 68.7 Å |
| skewness | -0.162 |
| kurtosis | -1.237 |
| angular_range | — – 0.2000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 360300.0000 |
| n_real_points | 41 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.134; Stabil: 0.999; Sysdev: 0.062; Positv: 1.000; Valcen: 0.456; Smooth: 0.008 |