9q6c
Cryo-EM structure of octameric COMMD-like protein MBK5214510 from Flavobacteriaceae bacterium
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9q6c |
| deposition_date | 2025-08-22 |
| title | Cryo-EM structure of octameric COMMD-like protein MBK5214510 from Flavobacteriaceae bacterium |
| keywords | COMMD, homooligomer, UNKNOWN FUNCTION; UNKNOWN FUNCTION |
| method | ELECTRON MICROSCOPY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 41.99 Å |
| rg_electron | 40.92 Å |
| i0 | 601683000.00 |
| molecular_weight | 204170.0 kDa |
| excluded_volume | 257630 ų |
| envelope_volume | 403740 ų |
| shell_volume | 79511 ų |
| envelope_diameter | 128.1 Å |
| shell_rg | 49.05 Å |
| envelope_rg | 39.33 Å |
| shape_rg | 40.90 Å |
| total_rg | 41.46 Å |
| total_atoms | 28968 |
| n_residues | 1760 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 123.7 Å |
| rg_real | 41.67 Å |
| rg_real_error | 0.58 Å |
| i0_real | 6.0170e+08 |
| i0_real_error | 8.1710e+06 |
| rg_reciprocal | 41.98 Å |
| i0_reciprocal | 601900000.0000 |
| total_estimate | 0.8847 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 1 |
| r_peak_primary | 55.4 Å |
| skewness | -0.014 |
| kurtosis | -0.477 |
| angular_range | — – 0.1900 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 120200000.0000 |
| n_real_points | 39 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.916; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.956; Smooth: 0.795 |