← Back to search
9qvf

Turnip Crinkle Virus: virus-like particles (TCV-P38+1)

Method: ELECTRON MICROSCOPY
▼

1. Protein Identity and Related Structures Protein Identity & Related Structures

Capsid protein

Turnip crinkle virus

UniProt P06663

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein homooligomer Homooligomer Protein 180 No other associated polymer Consistent with protein count

Other States of the Same Protein in the Database

Monomer
3zxa 3zxa 9gdw

3 assemblies

Homodimer

None

Homotetramer

None

Other homooligomers
3zx8 3zx8 3zx8 3zx8 3zx8 3zx9 3zx9 3zx9 3zx9 3zx9 3zxa 3zxa

18 assemblies; showing the first 12

Heteromeric or nucleic-acid complex

None

View Construct and Data Evidence
UniProt name CAPSD_TCV
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A； PDBConstruct 1–351； UniProt 1–351 Author chain B； PDBConstruct 1–351； UniProt 1–351 Author chain C； PDBConstruct 1–351； UniProt 1–351

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

▼

2. Structure Basics 2. Structure Basics

Entry ID entry_id9qvf
Deposition date deposition_date2025-04-11
Structure title titleTurnip Crinkle Virus: virus-like particles (TCV-P38+1)
Keywords keywordsssRNA plant virus, icosahedral, RNA packaging, VIRUS LIKE PARTICLE; VIRUS LIKE PARTICLE
Experimental Method methodELECTRON MICROSCOPY
▼

3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

9qvf__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

9qvf__assembly_1__model_1 | I(q)

10-2 10-1 105 106 107 108 109 1010 1011 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

9qvf__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）0.00 Å
Rg (electron density)142.80 Å
Total Rg142.70 Å
Atom count757620
Residues50280
Excluded volume6766400 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 9qvf__assembly_1__model_1 180-meric （180） Success 4.1.3-1-20251215 (887e7ef) View Download
▶

4. Crystallography and Experiment 4. Crystallography & Experiment

▶

5. Entities and Polymers Entities & Polymers (1)

▶

7. Citations (1)