9qvh
Turnip Crinkle Virus: virus-like particles (TCV-P38)
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9qvh |
| deposition_date | 2025-04-11 |
| title | Turnip Crinkle Virus: virus-like particles (TCV-P38) |
| keywords | ssRNA plant virus, icosahedral, RNA packaging, VIRUS LIKE PARTICLE; VIRUS LIKE PARTICLE |
| method | ELECTRON MICROSCOPY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 31.51 Å |
| rg_electron | 30.54 Å |
| i0 | 132915000.00 |
| molecular_weight | 90337.0 kDa |
| excluded_volume | 112770 ų |
| envelope_volume | 151680 ų |
| shell_volume | 40868 ų |
| envelope_diameter | 111.0 Å |
| shell_rg | 38.11 Å |
| envelope_rg | 30.09 Å |
| shape_rg | 30.52 Å |
| total_rg | 31.31 Å |
| total_atoms | 12627 |
| n_residues | 838 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 101.7 Å |
| rg_real | 31.30 Å |
| rg_real_error | 0.86 Å |
| i0_real | 1.3290e+08 |
| i0_real_error | 2.1420e+06 |
| rg_reciprocal | 31.39 Å |
| i0_reciprocal | 132900000.0000 |
| total_estimate | 0.8082 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 3 |
| r_peak_primary | 42.7 Å |
| skewness | 0.095 |
| kurtosis | -0.413 |
| angular_range | — – 0.2500 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 14860000.0000 |
| n_real_points | 51 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.840; Stabil: 0.998; Sysdev: 1.000; Positv: 1.000; Valcen: 0.988; Smooth: 0.000 |