9qzj
SARS-CoV-2 omicron stem-loop-II-motif (s2m_omicron)
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9qzj |
| deposition_date | 2025-04-23 |
| title | SARS-CoV-2 omicron stem-loop-II-motif (s2m_omicron) |
| keywords | SARS-CoV-2, omicron, s2m, RNA; RNA |
| method | SOLUTION NMR |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 12.83 Å |
| rg_electron | 12.80 Å |
| i0 | 647556000.00 |
| molecular_weight | 122380.0 kDa |
| excluded_volume | 114460 ų |
| envelope_volume | 15530 ų |
| shell_volume | 9792 ų |
| envelope_diameter | 48.2 Å |
| shell_rg | 18.88 Å |
| envelope_rg | 14.55 Å |
| shape_rg | 12.68 Å |
| total_rg | 13.06 Å |
| total_atoms | 12200 |
| n_residues | 380 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 44.5 Å |
| rg_real | 12.86 Å |
| rg_real_error | 0.37 Å |
| i0_real | 6.4760e+08 |
| i0_real_error | 6.9080e+06 |
| rg_reciprocal | 12.86 Å |
| i0_reciprocal | 647600000.0000 |
| total_estimate | 0.8487 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 16.4 Å |
| skewness | 0.368 |
| kurtosis | -0.280 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 61430.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.717; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.892; Smooth: 0.985 |